Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1314 ATGTCTCAACCACCTCCGCCACAGGCTCCGTCTTCCGCGGTGCCCGACAGCTGCCCCGCCGATGATGACAGATGTACCTTCTTCAATCAATCCATGGAGCTCGTCCAACTCCCATATCAAAGGTCAGGCAGAGCCCACGTCTCCCGCAGCCCCTCCCTCGCCGACCTACTTAAACGCGTCGGAGATTGTCAAAACGACGCCGTCTCCCAACCACACCAAGTCCTCGACCTCGCTCCTCCTCCCCCCTCTTACTCCTTTGTCCTTTCCTTCACCAACTTGACTTACAGCGTCAGAATCGGTCGCAAAATGAGCCTATCCTCTTGCTTCTCTCCGAAACACGTGGATATGGATTCCCCGCCGGAAGTTAATGGCGTGGCTGGATCTGAACCGAAGACTAACGATACTAAAGTTCTGCTCAATGGTATTTCCGGCGAGGCCCGAGATGGAGAAATCATGGCCGTTCTAGGCGCCAGTGGGTCCGGTAAATCGACACTGATCGACGCCCTCGCCAACAGAATTTCCAAAGAGAGCTTGAAAGGAACGATCACGTTAAACGGTGAAGCTTTGGATTCCAGTCTTCTGAAAGTGATTTCAGCTTATGTCATGCAGGACGACCTTCTCTTTCCCATGCTCACCGTGGAAGAGACCCTCATGTTTTCCGCCGAGTTCAGGCTCCCTCGCTCCCTCTCTAAGTCCAGAAAGAAGGCCAGAGTCCAAGCTCTCATCGACCAGTTGGGTCTCCGCAACGCCGCCAATACTGTCATCGGTGACGAGGGCCACCGGGGCGTCTCCGGAGGTGAACGACGTCGTGTTTCCATCGGAATTGATATCATTCACGACCCGATCATCCTGTTCCTCGACGAACCCACTTCAGGCCTTGACTCCACCAGCGCGTACATGGTCGTTAAGGTGCTACAACGAATAGCTCAAAGCGGAAGCATCGTCATCCTGTCCATACACCAACCAAGTTACAGAATCGTCGGATTATTAGACCGGTTGATTTTCCTCTCGCACGGGCAAACAGTATACAGCGGCTCTCCGGCGAATCTGCCGCGCTTCTTCTCGGAGTTCGGACACCCGATCCCCGATACCGAGAACAGCACCGAGTTCTCCCTCGATCTCATTCGTGAGCTCGAACAAAAACCTGGTGGAACCGATGGCTTAGTGGAATTCAACAAGTCTTGGCAATCGAATCACATGAAAAGCAAACCCAATAACGGCCATGAAACCACCATTAACGAACAAAGGGTTTCACTCAAGGACGCCATTGGCGCAAGCATTTCTCGAGGCAAGTTAGTCTCTGGGGCGCCAAATAATTCCAATCTCACAACATCTCCGTCTTTTCCAACCTTTGCAAACCCTTTTTGGATCGAAATGGCTGTGATAGCGAAACGATCGCTGATCAATTCCCGAAGGATGCCCGAACTGTTTGGCATTCGATTGGGTGCGGTTCTCGTAACCGGAATCATCCTGGCCACTATCTTCTGGCATCTCGATAGTTCTCCTAAAGGTGCTCAAGAACGATTAGGGTTCTTCGCCTTCGCCATGTCCACCACCTTCTACACCTGCGCTGAAGCCATGCCTGTGTTCCTCCAAGAGCGATACATCTTCATGAGAGAAACCGCGTACAATGCCTACCGTCGATCCTCCTACGTTCTGGCCCAGTCAATCATCTCGATCCCATCCTTAATTTTCCTCTCCTTAACATTCGCCGCCACGACATTCTGGGCGGTGGGTCTAGCGGGCGGCGCCTCCGGGTTCTTCTTCTACTTCTTGATTATCGTGGCGTCTTTCTGGGCAGGAAACTCGTTCGTGACGTTTCTTTCAGGAGTGGTTTCGCACGTGATGTTGGGCTTCACCGTGGTGGTCGCCCTTTTAGCTTACTTCGTGCTGTTCAGTGGGTTCTTCATAGCCAGAGATAGAATCCCCGCGTACTGGATATGGTTTCATTATATTTCACTGGTGAAGTACCCATACGAAGGCGTGTTGCTGAACGAGTTTGATATTCAGCCTCCGAGGTGCTTCGTGAGAGGGACTCAGATGTTCGACATGACGCCGCTGGGGGAGGTGCCGGAGACACTGAAGCTGGCGTTGCTAAAGAGTATGAGCAAGACGCTGGGGATGAACATCACGGGCTCGACGTGCGTGACCACGGGATTGGATCTACTGAAGCAGCAGGGGATTACGGACCTGAGCAAGTGGAATTGCCTGTGGATAACCATTGCATGGGGATTTTTCTTCAGATTTCTGTTTTATCTGGCTTTGATGTTTGGAAGCAAGAACAAGAGGACCTAA 2295 0.522 MSQPPPPQAPSSAVPDSCPADDDRCTFFNQSMELVQLPYQRSGRAHVSRSPSLADLLKRVGDCQNDAVSQPHQVLDLAPPPPSYSFVLSFTNLTYSVRIGRKMSLSSCFSPKHVDMDSPPEVNGVAGSEPKTNDTKVLLNGISGEARDGEIMAVLGASGSGKSTLIDALANRISKESLKGTITLNGEALDSSLLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKSRKKARVQALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVILSIHQPSYRIVGLLDRLIFLSHGQTVYSGSPANLPRFFSEFGHPIPDTENSTEFSLDLIRELEQKPGGTDGLVEFNKSWQSNHMKSKPNNGHETTINEQRVSLKDAIGASISRGKLVSGAPNNSNLTTSPSFPTFANPFWIEMAVIAKRSLINSRRMPELFGIRLGAVLVTGIILATIFWHLDSSPKGAQERLGFFAFAMSTTFYTCAEAMPVFLQERYIFMRETAYNAYRRSSYVLAQSIISIPSLIFLSLTFAATTFWAVGLAGGASGFFFYFLIIVASFWAGNSFVTFLSGVVSHVMLGFTVVVALLAYFVLFSGFFIARDRIPAYWIWFHYISLVKYPYEGVLLNEFDIQPPRCFVRGTQMFDMTPLGEVPETLKLALLKSMSKTLGMNITGSTCVTTGLDLLKQQGITDLSKWNCLWITIAWGFFFRFLFYLALMFGSKNKRT 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1314 764 Pfam ABC transporter 139 291 IPR003439 GO:0005524
Lele07g1314 764 SMART AAA_5 148 363 IPR003593 -
Lele07g1314 764 Pfam ABC-2 type transporter 320 381 IPR043926 GO:0140359
Lele07g1314 764 Gene3D - 127 354 IPR027417 -
Lele07g1314 764 Pfam ABC-2 type transporter 461 667 IPR013525 GO:0016020|GO:0140359
Lele07g1314 764 ProSitePatterns ABC transporters family signature. 263 277 IPR017871 GO:0005524|GO:0016887
Lele07g1314 764 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 354 IPR027417 -
Lele07g1314 764 MobiDBLite consensus disorder prediction 1 20 - -
Lele07g1314 764 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 64 752 - -
Lele07g1314 764 FunFam ABC transporter G family member 6 128 354 - -
Lele07g1314 764 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 120 363 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1314 Lele-ChrLele07 7941715 7944009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1314 112 350 Calmodulin-binding Proteins AT2G36910 26.423 8.04e-11 63.9