Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1308 ATGGAAGAAACCTCAACCATATTGGCTGCCCTCTCCGCCCTCCCTCCCTCTCAACTCTCCGATCTTGCTCACTCCATCGCCTCCGTCGTCCGCCGCCACCATCTCCGCCTCGCCTCCGTCCTCTCTTCCCAATCCCTCTTCTCCCTCGCCCTCCACTACCTCCAATCTCTCTCACTCCCCCAGAAGTCCCTCCTCATTGCCCGCCACCTCCTCTCTTCCCTCCACATCCTCACGCGCCTCCTCGAACCGCCGCCGCCTCCATTATCTACGGTCATGAGACAGCGTGACCTCGACGCCGTCCTGCTACTCCTCTTATTCTGCGATGCCCACCAGCACCATCCGCGAGCTCTCGAAGCGCCGGTTTGCGATTGGCGCAGAAATCTGAGCAAGCTCTTCTCCGATAAATTGTTGGGGATGTCTTCTGCTCCTATCGGGGAATGCAGTGCCGCGATTTTGATTCCCTATATTGAGATGGTGATACGGTGCCGGAGGCTGGCGGGTTCAATGGGATGCGACGGAGGAAAGGGTGGCAGGGAAGTGGCGGCGTCGATGGCGGCGGTGGCGGCGCTGCCGAGAGTGGAGGTGAGGGCGGGTGGAAGAGAGTGCGTGATATGCAAAGAGGAGATGGGGGTGGGGAGGGATGTGTGCGAACTGCCATGTCAGCACGTGTTTCATTGGAATTGCATATTACCGTGGCTAAGTAAAAGGAACACGTGTCCCTGCTGCCGGTTCCGGTTGCCGTCCGATGATGTTCTGGGAGAGATCCAACGGCTGTGGGAAGTCCTGGTCAAAACGTGTGGGGCAGAGTGGGGCGATTGA 819 0.591 MEETSTILAALSALPPSQLSDLAHSIASVVRRHHLRLASVLSSQSLFSLALHYLQSLSLPQKSLLIARHLLSSLHILTRLLEPPPPPLSTVMRQRDLDAVLLLLLFCDAHQHHPRALEAPVCDWRRNLSKLFSDKLLGMSSAPIGECSAAILIPYIEMVIRCRRLAGSMGCDGGKGGREVAASMAAVAALPRVEVRAGGRECVICKEEMGVGRDVCELPCQHVFHWNCILPWLSKRNTCPCCRFRLPSDDVLGEIQRLWEVLVKTCGAEWGD 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1308 272 SUPERFAMILY RING/U-box 199 248 - -
Lele07g1308 272 ProSiteProfiles Zinc finger RING-type profile. 202 243 IPR001841 -
Lele07g1308 272 Pfam Ring finger domain 201 243 IPR001841 -
Lele07g1308 272 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 175 249 IPR013083 -
Lele07g1308 272 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 148 247 - -
Lele07g1308 272 SMART ring_2 202 242 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1308 Lele-ChrLele07 7924756 7925574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1308 2 265 C3H Transcription Factor Family AT5G02750 50.362 4.75e-82 246