Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele07g1304 | ATGGCTGCTGCGGCTTTGCGGGAAATTCTTCCTCCGCCATTAACTTCCAACTCATTACCGCCCTCGTCTCTTTTCGATGGAACCACCAGATTGTACGTTAGCTATACTTGCCCTTTCGCACAACGTGTATGGATCACTAGGAACTACAAGGGACTTCAAGACAAGATCAAATTAGTTGCTATCGATCTCCAAGACAGGCCTGCTTGGTATAAGGAGAAAGTCTACCCTGAAAATAAGGTTCCAACGTTGGAACATAACGGCAGGGTTTTGGGAGAGAGTTTGGATTTGATCAAATACGTTGATTCAAACTTTGAAGGGCCATCTTTGTTTCCCAGTGATCCTGTCAAGAGCGAGTTCGGTGAGCAGTTGATTTCCCACGTCGATACATTCGTCAGGGAAGGGTTCACTTCAATGAAAGCCACAGATCCTGTACAACAAGCCAGTCCTGCTTTTGATTTCTTGGAGAATGCTCTTGGTAAATTCGAAGATGGGCCATTCTTCCTTGGCCAATTTAGTTCGGTGGACATTGCCTATGTTCCATTTGTCGAAAGATTCCAAGTCGTCTTTTTTGAGGTTTTCAAGCATGATGTCACAGAAGGAAGGCCTAAACTTGCTGCATGGATTGAGGAAGTGAACAAGATTGGTGCATATACCCAGACAAGAACTGATCCTAAGGAAATCGTTGACGTGTTCAAGAAACGTTTTTTGGCTCCACAGTGA | 720 | 0.4458 | MAAAALREILPPPLTSNSLPPSSLFDGTTRLYVSYTCPFAQRVWITRNYKGLQDKIKLVAIDLQDRPAWYKEKVYPENKVPTLEHNGRVLGESLDLIKYVDSNFEGPSLFPSDPVKSEFGEQLISHVDTFVREGFTSMKATDPVQQASPAFDFLENALGKFEDGPFFLGQFSSVDIAYVPFVERFQVVFFEVFKHDVTEGRPKLAAWIEEVNKIGAYTQTRTDPKEIVDVFKKRFLAPQ | 239 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele07g1304 | 239 | SFLD | Glutathione Transferase (cytosolic) | 30 | 212 | IPR040079 | - | |
| Lele07g1304 | 239 | SUPERFAMILY | GST C-terminal domain-like | 104 | 235 | IPR036282 | - | |
| Lele07g1304 | 239 | Pfam | Glutathione S-transferase, N-terminal domain | 31 | 107 | IPR004045 | - | |
| Lele07g1304 | 239 | FunFam | Glutathione S-transferase L2, chloroplastic | 1 | 105 | - | - | |
| Lele07g1304 | 239 | Pfam | Glutathione S-transferase, C-terminal domain | 144 | 209 | - | - | |
| Lele07g1304 | 239 | FunFam | Lambda class glutathione S-transferase | 106 | 238 | - | - | |
| Lele07g1304 | 239 | CDD | GST_C_Lambda | 113 | 232 | - | - | |
| Lele07g1304 | 239 | Gene3D | - | 106 | 238 | - | - | |
| Lele07g1304 | 239 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 6 | 235 | IPR044629 | GO:0004364 | |
| Lele07g1304 | 239 | Gene3D | Glutaredoxin | 1 | 105 | - | - | |
| Lele07g1304 | 239 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 27 | 108 | IPR004045 | - | |
| Lele07g1304 | 239 | SUPERFAMILY | Thioredoxin-like | 17 | 109 | IPR036249 | - | |
| Lele07g1304 | 239 | SFLD | Main (cytGST) | 30 | 212 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele07g1304 | Lele-ChrLele07 | 7909996 | 7911856 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele07g1304 | 11 | 236 | Glutathione S-transferase Gene Family | AT5G02790 | 67.699 | 1.54e-115 | 328 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele07g1304 | 07 | 7909996 | 7911856 | Lele13g1814 | 13 | 26236224 | 26238679 | CCT | |
| Lele07g1304 | 07 | 7909996 | 7911856 | Lele14g1757 | 14 | 24626143 | 24628679 | CCT | |
| Lele07g1304 | 07 | 7909996 | 7911856 | Lele15g0592 | 15 | 3492210 | 3494639 | CCT | |
| Lele07g1304 | 07 | 7909996 | 7911856 | Lele16g0606 | 16 | 3412929 | 3415467 | CCT | |
| Lele07g1304 | 07 | 7909996 | 7911856 | Lele08g1109 | 08 | 6981271 | 6989146 | ECH | |
| Lele07g1304 | 07 | 7909996 | 7911856 | Lele07g1304 | 07 | 7909996 | 7911856 | ECH | |
| Lele05g1258 | 05 | 7867592 | 7869194 | Lele07g1304 | 07 | 7909996 | 7911856 | hybridization | |
| Lele06g1122 | 06 | 6989084 | 6993711 | Lele07g1304 | 07 | 7909996 | 7911856 | hybridization |