Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1301 ATGGGTTGCATTCCCTGTTCTGGAAATTCAAACACTAAGAAGAAGACAAAGAAGAAGCCGAAGAAGATGGAGGTGCAGGAGAGCATGGTTGATCCGATAAAAGCAGCCTCAGGGAAGTTGAAGAGAAATTCATCTACAAATTCCAAGGATACCTCTAAAACTGGGAACTCTGACCACATAGCAGCACAGACTTTCACATTTAGTGAGTTGGCAACTGCAACAAGAAATTTTAGATCTGAATGCATGCTGGGTGAGGGAGGTTTTGGAAGAGTATACAAAGGGCGCTTGGAAAGTAGTAATCAGGTTGTTGCAATTAAGCAACTTGACCGTAATGGGCTGCAAGGGAATAGAGAATTCCTAGTTGAAGTGTTGATGTTAAGTCTACTACACCACCCTAACCTTGTGAGCCTCATTGGTTATTGTGCTGATGGAGATCAAAGGCTTTTAGTTTATGAATATATGCCATTAGGATCCTTGGAAGACCACTTACATGATGTTTCTCCTGGCAAGAAACATCTCGACTGGAATACAAGAATGAAAATAGCAGCTGGGGCTGCAAAAGGGTTGGAATATTTGCATGACAAAGCTAATCCTCCTGTCATATACCGAGATTTGAAGTGCTCAAACATTTTGCTTGGTGAAGGGTTTCATCCAAAGTTATCTGATTTTGGCTTGGCCAAACTTGGACCAGTAGGCGAGAACACTCATGTGTCAACAAGGGTTATGGGCACCTACGGTTATTGTGCTCCGGAGTATGCAATGACAGGACAACTGACTCTGAAATCAGATGTCTATAGCTTTGGTGTAGTTCTTCTGGAAATAATTACTGGAAGGAAAGCTATTGACAATTCAAAGGCTGCTGGAGAACAGAATCTTGTTGCATGGGCAAGACCTTTGTTTAAAGATCGACGAAAATTTTCACAAATGGTGGATCCAATGCTCCAAGGTCAGTATCCTTCAAGAGGCCTATACCAGGCCCTTGCAGTTGCTGCAATGTGTGTTCAAGAGCAGGCTAACATGCGTCCAGTTATAACTGATGTAGTCACAGCTTTGTCTTACCTTGCTTCACAAAGATACGACCCGAATTCACAGTCGCTCCAAAGCTTTCGCCTTTCCCCAGCCACTCCTAGGAACAGGAGGGGGCAGTGA 1149 0.4352 MGCIPCSGNSNTKKKTKKKPKKMEVQESMVDPIKAASGKLKRNSSTNSKDTSKTGNSDHIAAQTFTFSELATATRNFRSECMLGEGGFGRVYKGRLESSNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYEYMPLGSLEDHLHDVSPGKKHLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGFHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKAAGEQNLVAWARPLFKDRRKFSQMVDPMLQGQYPSRGLYQALAVAAMCVQEQANMRPVITDVVTALSYLASQRYDPNSQSLQSFRLSPATPRNRRGQ 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1301 382 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Lele07g1301 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Lele07g1301 382 Pfam Protein tyrosine and serine/threonine kinase 81 350 IPR001245 GO:0004672|GO:0006468
Lele07g1301 382 FunFam Serine/threonine-protein kinase PBS1 154 369 - -
Lele07g1301 382 PANTHER OS07G0668900 PROTEIN 3 363 - -
Lele07g1301 382 MobiDBLite consensus disorder prediction 39 57 - -
Lele07g1301 382 Gene3D Phosphorylase Kinase; domain 1 46 153 - -
Lele07g1301 382 FunFam Serine/threonine-protein kinase PBS1 49 153 - -
Lele07g1301 382 MobiDBLite consensus disorder prediction 1 57 - -
Lele07g1301 382 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1301 382 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1301 382 Gene3D Transferase(Phosphotransferase) domain 1 154 372 - -
Lele07g1301 382 CDD STKc_IRAK 83 351 - -
Lele07g1301 382 SUPERFAMILY Protein kinase-like (PK-like) 58 351 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1301 Lele-ChrLele07 7892324 7895130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1301 40 356 Glycoside Hydrolase AT3G07070 67.823 4.13e-164 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele07g1301 PK_Tyr_Ser-Thr 2.3e-46 CL0016