Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1300 ATGGATGTTAAGGAAGCAGAAAGGGTAGTTGTTGCAAAACCAGTAGCTTCAAGACCTACTTGCCCACCTTTTAGATCCTTCTCCGAGCTACTTGCAGGTGCCATCAATGCGTCTCCATCTATTGAATCTTCTCGAGCCACAGTTTCAGCCATTAGACCAAAGACTGTGAGGTTCAAGCCAGCCATGAATTGCCCGCCTCCTGCCAGGTTTATTTCTTCTGAGGCTAGCCCATCTTACAAAAGTCATAAACCAGACACTAATCAAACAGTTGTTTACAAGCCTACGGCTAAGTTTGTCTCCAAGGCCACTGTTTCTCTTTTGGCAAATATGGGAAATTATAGTACCAGTCACGGCCAGCCGTTTCAACATCCCAATCAGGAGAAACTGAGGACCAATTTGAGCTCAATGAATCATCAGAACACTACCACACCACGTGCTGAATCAAATCTGGCAATTGAATGCTTCAAGATGGTACAGCAGAGCCCAGAAGAGGACCAGAAAACTTCGCCATCTACTAGTAATGGTTGTGATAGACCTTGTTATGATGGGTATAACTGGAGGAAATATGGTCAGAAGCAAGTTAAAGGAAGCGAGTATCCAAGGAGTTATTACAAATGCACGCATCCCAATTGCCAAGTGAAGAAGAAGGTTGAAAGATCATTTGATGGGCAGATTGCAGAAATTGTGTACAAAGGGGAACACAACCATTCAAAGCCTCATCCTCCTAAGCGCAACTCGGCAGGAACACAAGGATTGGGAATTGTGTCTGATGGATTGAATCAAGATACTAATTGTAATAATAACCATTTACGGGGTAATCCTAACAGTGAGAGGAATGAAAATAGAATAGAGAACCAGAGTGAGGCAGGTTATCTTGTCAAAGCTGGAGGAAGCCCTGAGAATTCATATGCTCAAAGTGAGGAATGTGAGGAAGGAAGCAAGGGAAATGAAGTGGAGGAAGATGAACAACCAAAAAGTAAAAGAAGGAAAAAAGAGAATAAATCCAATGAAGTAGCAGAGGAAGGTTTAGTGGAGCCCCAAGTGGTGGTTCAGAGTTCTAAAGATTCTGAAGTACTGGGAGACGGCTTTCGCTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGCAATCCATATCCCAGAAGTTATTACAGATGCACTAACATAAAGTGCGGTGCCCGGAAACATGTGGAAAGATCAATAGATGATCCAAAAGCATTTATCACTACTTATGAGGGGAAACACAACCATGAGATGCCACGCAAAACTATAGGTTCTGTGGCCTCTGAAAAAGTCAAGCCATGA 1302 0.4332 MDVKEAERVVVAKPVASRPTCPPFRSFSELLAGAINASPSIESSRATVSAIRPKTVRFKPAMNCPPPARFISSEASPSYKSHKPDTNQTVVYKPTAKFVSKATVSLLANMGNYSTSHGQPFQHPNQEKLRTNLSSMNHQNTTTPRAESNLAIECFKMVQQSPEEDQKTSPSTSNGCDRPCYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSFDGQIAEIVYKGEHNHSKPHPPKRNSAGTQGLGIVSDGLNQDTNCNNNHLRGNPNSERNENRIENQSEAGYLVKAGGSPENSYAQSEECEEGSKGNEVEEDEQPKSKRRKKENKSNEVAEEGLVEPQVVVQSSKDSEVLGDGFRWRKYGQKVVKGNPYPRSYYRCTNIKCGARKHVERSIDDPKAFITTYEGKHNHEMPRKTIGSVASEKVKP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1300 433 Pfam WRKY DNA -binding domain 361 417 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g1300 433 Pfam WRKY DNA -binding domain 182 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g1300 433 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 102 421 IPR044810 GO:0003700
Lele07g1300 433 SUPERFAMILY WRKY DNA-binding domain 179 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele07g1300 433 MobiDBLite consensus disorder prediction 318 339 - -
Lele07g1300 433 SMART WRKY_cls 180 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g1300 433 SMART WRKY_cls 359 418 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g1300 433 MobiDBLite consensus disorder prediction 232 280 - -
Lele07g1300 433 FunFam WRKY transcription factor 346 420 - -
Lele07g1300 433 ProSiteProfiles WRKY domain profile. 182 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g1300 433 MobiDBLite consensus disorder prediction 412 433 - -
Lele07g1300 433 MobiDBLite consensus disorder prediction 249 274 - -
Lele07g1300 433 ProSiteProfiles WRKY domain profile. 354 419 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g1300 433 Gene3D WRKY domain 156 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele07g1300 433 Gene3D WRKY domain 344 420 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele07g1300 433 SUPERFAMILY WRKY DNA-binding domain 354 419 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele07g1300 433 FunFam WRKY transcription factor 165 240 - -
Lele07g1300 433 MobiDBLite consensus disorder prediction 293 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1300 Lele-ChrLele07 7881151 7882814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1300 361 433 WRKY Transcription Factor Family AT2G37260 48.718 1.97e-15 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele07g1300 WRKY 2.3e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1300 07 7881151 7882814 Lele13g1811 13 26216577 26218787 CCT
Lele07g1300 07 7881151 7882814 Lele14g1753 14 24604041 24607574 CCT
Lele07g1300 07 7881151 7882814 Lele15g0597 15 3513599 3515784 CCT
Lele07g1300 07 7881151 7882814 Lele16g0611 16 3439581 3441773 CCT
Lele05g1254 05 7845020 7846663 Lele07g1300 07 7881151 7882814 hybridization
Lele06g1119 06 6963173 6964876 Lele07g1300 07 7881151 7882814 hybridization