Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1299 ATGACAAGGGGTGCCGATAAAGAATTACAAGAATTGACTCAGCGTCTACGAGTTGGGAAGAAAATCCTTAGTGATGGAGTTAGCGGTGAGGAACTTGGATTTTATGAGAAAAATGAGTTGAAAGTTAATGGAATAGTCGAAGAATTTAAGGTTGGACAAGGGGAGACAGTGAAAAGCCCTGTTGTCCAGCCTATAGTAAAGCAACAGAGTCAAGGGGAAAATGTTTGTTGGGAGAGGTTTTTACATCTTGGATCCCTTAAGGTCTTGCTTGTGGAGAATGATAACTCTACTCGCCATGTTGTCAATGCACTGCTTCGCAATTGTTGTTATGAAGTTATTGAAGCAGCAAATGGACTGCAAGCATGGAAGATGTTGGTGGATTTAACTAATCATATTGATCTCATTTTAACCGAGGTGGAAATGCCTTGCTTATTAGGAATTGGTCTTCTATCCAAGATTATGGGTCACCAAACACGGTAG 480 0.4062 MTRGADKELQELTQRLRVGKKILSDGVSGEELGFYEKNELKVNGIVEEFKVGQGETVKSPVVQPIVKQQSQGENVCWERFLHLGSLKVLLVENDNSTRHVVNALLRNCCYEVIEAANGLQAWKMLVDLTNHIDLILTEVEMPCLLGIGLLSKIMGHQTR 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1299 159 ProSiteProfiles Response regulatory domain profile. 87 159 IPR001789 GO:0000160
Lele07g1299 159 SUPERFAMILY CheY-like 85 155 IPR011006 -
Lele07g1299 159 Pfam Response regulator receiver domain 88 157 IPR001789 GO:0000160
Lele07g1299 159 Gene3D - 82 159 - -
Lele07g1299 159 PANTHER TWO-COMPONENT RESPONSE REGULATOR 87 153 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1299 Lele-ChrLele07 7865403 7866250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1299 75 158 Response Regulator Gene Family AT5G60100 61.905 6.42e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele07g1299 Response_reg 1.8e-08 CL0304