Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1292 ATGGCCGCCGCAGCTCGCCCTCTTGTCACCGTCCAATCACTCGAGGGTGACATGGCCACTAATGCTGCTCCAACTGTTCATCTTCCTGATGTCATGAAGGCTGCCATTCGCCCAGACATCGTCACCTTCGTTCATGCCAACATTTCTAAGAACGGTCGCCAACCCTATGCCGTCAGCAAGCGTGCTGGTCACCAGACCTCGGCCGAATCATGGGGTACTGGCCGTGCTGTGTCTCGTATCCCCCGTTTCCCCGGCGGCGGTACCCACCGTGCTGGTCAGGGTGCTTTTGGTAATATGTGTCGTGGTGGTCGTATGTTCGCTCCTACCAAGATTTGGCGCCGATGGCACCGTAAGATCAATGTCAATCAGAAGCGTTACGCCGTCGTTTCGGCCATTGCTGCCTCGGCAATCCCATCCGTTGTCATGGCTCGTGGCCACAGAATTGAGTCTGTTCCGGAAATGCCTCTTGTGGTCAGCGACTCAGCTGAGGGTTTTGAGAAGACTAAGGATGCTATCAAGGTGATGAAGCAGATCGGCGCTTTTCCTGATGCCGAGAAAGCAAAGGATAGCCACTCCATCAGACCTGGTAAGGGGAAAATGAGAAATCGCCGATACATCTCTCGCAAGGGTCCTCTGATTGTGTATGGAACTGAAGGAGCCAAGGCTGTGAAAGCTTTTAGAAACATTCCAGGGGTCGAGGTTGCTAATGTTGAGAGGCTGAATCTTCTCAAGTTAGCTCCTGGTGGTCATCTGGGCAGGTTCGTTATTTGGACTAAGTCTGCTTTTGAGAAACTTGATTCGATTTATGGGTCGTTCGACAAATCTTCAGAGAAGAAGAAAGGGTACTCTCTTCCAAGGGCCAAGATGGTTAATAGTGACTTGGCTAGGATTATCAACTCTGATGAGATTCAATCCGTTGTGAGACCCATCAAGAAGGAAATTAAGAGGGCAACACTCAAGAAGAACCCGCTCAAGAACCTGAATGCTATGTTGAAACTGAACCCATATCATAAGACTGCTGAGAGGATGGCTCTTCTTGCTGAGGCTCAACGGGTTAAAGCAAAGAAAGAGAAGCTTGATAAGAAGAGGAATTCTATGTCTAAGACACTTGCATCCATTCATGTTGCTTGCGATAGTTGTTTCATGTCACGTTTACTTTCTACAGAATTGCAAATTATATTTCTTCGGGGAAGCGAGGAGGCTTCTGCTATTAAGGCTGCAGGAAAAGCGTGGTATCAAACCATGGTGTCGGACTCTGATTATGCAGAATTTGAGAACTTTTCGAAGTGGTTGGGTGTTTCACAGTGA 1308 0.487 MAAAARPLVTVQSLEGDMATNAAPTVHLPDVMKAAIRPDIVTFVHANISKNGRQPYAVSKRAGHQTSAESWGTGRAVSRIPRFPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAIPSVVMARGHRIESVPEMPLVVSDSAEGFEKTKDAIKVMKQIGAFPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKSSEKKKGYSLPRAKMVNSDLARIINSDEIQSVVRPIKKEIKRATLKKNPLKNLNAMLKLNPYHKTAERMALLAEAQRVKAKKEKLDKKRNSMSKTLASIHVACDSCFMSRLLSTELQIIFLRGSEEASAIKAAGKAWYQTMVSDSDYAEFENFSKWLGVSQ 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1292 435 Pfam Ribosomal protein L4/L1 family 27 266 IPR002136 GO:0003735|GO:0005840|GO:0006412
Lele07g1292 435 SUPERFAMILY Ribosomal protein L4 11 267 IPR023574 GO:0003735|GO:0005840|GO:0006412
Lele07g1292 435 PANTHER 60S RIBOSOMAL PROTEIN L4 4 428 IPR045240 -
Lele07g1292 435 Coils Coil 342 369 - -
Lele07g1292 435 FunFam 60S ribosomal protein L4 3 308 - -
Lele07g1292 435 ProSitePatterns Ribosomal protein L1e signature. 120 146 IPR013000 -
Lele07g1292 435 Gene3D - 3 308 IPR023574 GO:0003735|GO:0005840|GO:0006412
Lele07g1292 435 Pfam 60S ribosomal protein L4 C-terminal domain 280 352 IPR025755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1292 Lele-ChrLele07 7834383 7836192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1292 2 435 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 76.037 0.0 661