Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1291 ATGCAATGTGGACCAATAAACTTTGGTTCCGAAGAAATCGATCCTGGGACGATAATATTCTTTGTTTTGTCTTGGTGTGATAGAATCCACAACTTCATTAAAATTTTTCTCCCCCATCTCCACAAGGGTTTTGGGGAAGAATTTGTGAGCTGAACCTTAACTTTTAGCCAAGGTAATGCTTCTCTCCAAACGGGATTAGCAACTGCAAATGATTATGATTATATCTTTCAAATGCGATTGCCAAATTTACTTGATGGTGATTCCCTTATGCATGGTGCCCTATTTGTTGATAACGGCAGGGGAAAAGGCCCTCCACCTCTCTTTTTCCGTCCAAGAGTTATTTCAAAATCATCGGTTGCGCGTGACTCTGTGGTCACCATGTTGGATCTTAATCTCAACGTCGTTTCCTCTGATTCCGCGTCGAATTCCCTCGACGTGCCTGCCGAGAATGTTGTGCTACTTTCTGGTAGCCAAATGGATAGCTCTGGAAGCTTTAATTCTTCCATCGTCAATGCCGATACCTCCACCAATACTTTTGATGAAGACTCTTGTTCTTACGGTGATGCCTTTGCTAACAACTTTGGAACAGTGCAGAAGAATAACATAGATGATGGCACAAACTACAAAGCAGTTGATCTTCCAGTTGGTGAAGGTGAAGATGCCTGGGATCGGACCATCCAGCTTTTTCCGATCGCCGGTGCCGAAGAGGGTCGTGTCACTGATGACCGATTTCCAGGTTCGTCTTCAAGTAAGGGATGGTTGGATTTCCTGTGCAAGGAGGTGGGTCCCGGTGGAACGCCGGAACAGAGGATGCCGCCGCCGCCACAGCAGAAACCGCAGGTCAAGAAGAGTCGGAGGGGACCGAGGTCACGGAGCTCACAGTATCGCGGTGTTACATTTTATCGAAGAACTGGAAGATGGGAATCGCATATATGGGATTGTGGAAAACAAGTTTACTTGGGCGGATTTGATACAGCACATGCTGCGGCAAGGGCATATGATCGAGCTGCAATCAAGTTCCGTGGCCTTGATGCTGATATTAATTTCAATGTTAGTGATTATGAGGAGGATATAAAGCAGATGAGTAATTTCACAAAGGAAGAGTTCGTGCATATTCTGCGGCGACAGAGCACTGGCTTTTCAAGGGGAAGCTCTAAATATAGAGGAGTCACTCTGCATAAATGTGGGCGATGGGAAGCTCGCATGGGGCAGTTTCTAGGGAAGAAGGTGCTACAATCTTATGAAACCAGGGCATATGATAAAGCGGCTATAAAATGCAATGGGAGGGAAGCAATGACGAACTTTGAGCCAAGCTCATACGAAGGGAACATAATCTCTCAGGCAGAAAATGAAGATCGCAACCCAAATCTTGATCTTAGCTTGGCCATTGCTCCGCCTGCTTTCTCTAATGGTTTCCAAGTCCAGCATGGCTGGGCCAATCTTCCTGTTGATGGGAGAGTTGCGGGTCAGCCGTCTAATGCTTTCCCGATTGCACCCCAGCACCCTTCTGCCTGGAATAGTACTGATTTCTTTCCCATTAATCAGGAAAGAGCAATGGAGAAAAGAATGGAAGCTAATTCCCTGCCAAACTGGGTATTTCAGTACCAAGTTCCGTATGGCGAGGCAACGTTGGTTCCATCCTTCTCTGCTGCAGCATCATCAGGATTCCCTTCAACGAGCATTCATGTTCGGCTTTCTGAAAAGAAATGTGGAACGTATAATTACAGCTCACCTGAGCTGGGTGACGTTTTGGTGTGGGAACGAAGCAAATGCGAAGAAGAAAGAATGGAATTGAGGTATGAGATAAATTATGGAATTGAGGGGCTTAACAACAGAATTGTTGGATTGTATGCCTTGTCATTAGCAAACCCAATCCATTTGCTTCCTATTCCTCGCCTTGTATCTGGGGCGGGGAAAATTGGTTCTGATTATCCACCGCACATGGGAGACGCTTCATTGCCTTAG 1965 0.4601 MQCGPINFGSEEIDPGTIIFFVLSWCDRIHNFIKIFLPHLHKGFGEEFVSXTLTFSQGNASLQTGLATANDYDYIFQMRLPNLLDGDSLMHGALFVDNGRGKGPPPLFFRPRVISKSSVARDSVVTMLDLNLNVVSSDSASNSLDVPAENVVLLSGSQMDSSGSFNSSIVNADTSTNTFDEDSCSYGDAFANNFGTVQKNNIDDGTNYKAVDLPVGEGEDAWDRTIQLFPIAGAEEGRVTDDRFPGSSSSKGWLDFLCKEVGPGGTPEQRMPPPPQQKPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFNVSDYEEDIKQMSNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKVLQSYETRAYDKAAIKCNGREAMTNFEPSSYEGNIISQAENEDRNPNLDLSLAIAPPAFSNGFQVQHGWANLPVDGRVAGQPSNAFPIAPQHPSAWNSTDFFPINQERAMEKRMEANSLPNWVFQYQVPYGEATLVPSFSAAASSGFPSTSIHVRLSEKKCGTYNYSSPELGDVLVWERSKCEEERMELRYEINYGIEGLNNRIVGLYALSLANPIHLLPIPRLVSGAGKIGSDYPPHMGDASLP 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1291 654 PRINTS Ethylene responsive element binding protein signature 387 398 IPR001471 GO:0003700|GO:0006355
Lele07g1291 654 PRINTS Ethylene responsive element binding protein signature 418 438 IPR001471 GO:0003700|GO:0006355
Lele07g1291 654 Gene3D AP2/ERF domain 293 352 IPR036955 GO:0003700|GO:0006355
Lele07g1291 654 Gene3D AP2/ERF domain 385 437 IPR036955 GO:0003700|GO:0006355
Lele07g1291 654 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 266 457 - -
Lele07g1291 654 FunFam AP2-like ethylene-responsive transcription factor 293 352 - -
Lele07g1291 654 ProSiteProfiles AP2/ERF domain profile. 386 436 IPR001471 GO:0003700|GO:0006355
Lele07g1291 654 SUPERFAMILY DNA-binding domain 293 352 IPR016177 GO:0003677
Lele07g1291 654 Pfam AP2 domain 294 342 IPR001471 GO:0003700|GO:0006355
Lele07g1291 654 CDD AP2 294 352 IPR001471 GO:0003700|GO:0006355
Lele07g1291 654 SMART rav1_2 294 356 IPR001471 GO:0003700|GO:0006355
Lele07g1291 654 SMART rav1_2 386 442 IPR001471 GO:0003700|GO:0006355
Lele07g1291 654 MobiDBLite consensus disorder prediction 257 295 - -
Lele07g1291 654 ProSiteProfiles AP2/ERF domain profile. 294 350 IPR001471 GO:0003700|GO:0006355
Lele07g1291 654 SUPERFAMILY DNA-binding domain 385 437 IPR016177 GO:0003677
Lele07g1291 654 CDD AP2 385 438 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1291 Lele-ChrLele07 7825490 7834178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1291 127 409 AP2-EREBP Transcription Factor Family AT2G28550 59.091 6.06e-80 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele07g1291 AP2 3.7e-10 CL0081