Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1278 ATGTTTGATCCCGTGATATTATTGTCACATCGAGGTTCTGGTTTTTATGCCGCCCACAGGATCAAATCGAGGAATGCCAAGAAGATGGGGAGGAAGGGAAATTGGTTTTCTACTGTGAAGAAAGCTTTCAGCCCAGAGTCAAAGAAAAAGGAAGATCAGAAATCAAGCAAGTCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGGAGATCTCCTCAGACTCGTACGTGGGTTCTGAGAAAACAGCACGCTCCTCTGCTCCTCCACCTGAAGAAATTAAATCATATGATGTTGAGAACGAAGCCAGTCAAAGTCATGTTCATGAAGTTGCAACTTCTGTGGATTCTGTGAGACCAATCCCTGCTGTACAGACTGCAGCTGTCGCAATTCAAGCCCCTAAAATCACTCGGTTCGCCGGTAGATCAAGGGAAGAGGTGGCTGCAATAAAGGTTCAGACAGCTTTTAGAGGATATCTGGCAAGAAGAGCTTTGCGAGCTCTAAGAGGGCTGGTGAGATTGAGGACACTCATGGAAGGGCCAATTGTAAAACGCCAAGCCACTAGCACTCTTCGTTCTATGCAAACTTTAGCTCGTGTGCAATCTCAGATTCGTTCTAGAAGGATCAGGATGTTCGAGGAGAATCAGGCTCTGCAAAGGCAACTCCTACACAAGCATGCAAAAGAGCTCGAGAGCATGCGGATTGGAGAGGAATGGGATGATAGCCTCCAGTCCAAAGAACAAATTGAAGCCAAGTTACTACAAAAGTATGAGGCAGCTATGAGAAGAGAAAAAGCGCTGGCTTATGCATTCACTCATCAGCAAACATGGAAGAATTCATCCAGATCGATAAACCCAATGTTCATGGATCCAACAAATCCTTCGTGGGGTTGGAGCTGGCTGGAACGATGGATGGCAGCACGGACATTGGAGAGCCGAAGCACAATGGAGAAAGAAATGAACGATGATCGTTCATCTGTGAGAAGTTGTAGCCGCAGCATCACTGGTGGAGAAATCAGCAAATCATATGCTCGTCACCAACTCAATGCGGAAAAGCATTCTCCAACACCAAGCCAAATCCCAGACTCGCCTAGCTTCCAATCATATTCAACTCCTTCAAAGCCAGCTTCCAGAAAACTGAAGAAGGCCAGCCCAAAGAACAGCTTTGCCATGGATGATGACATTAAAAGTGTAGCCATTACGCAGTCGGCGCGGTTCCGGCGGCACTCCATTGGGGGCGCGTCGGTGAGAGACGACGAGAGCCTTGCGAGCTCCCCGGCGGTTCCTAGTTATATGGTGGCGACTCAGTCTGCAAAAGCCAAGTCTAGGACGCAGAGTCCATTGGCAGCGGAGAATGGCACGCCACAGAAAGAGAAAGGATCTTTTGGGACAGCAAAGAAACGGCTTTCTTACCCAACGTCACCGGCGAGGCCATGGCGGCATTCAAGTGGGCCACCAAAGGTCGAAAACAACTTAAATGCAGAAATCACTATGGGTAATGGTGGGGCCGCCTAA 1509 0.4805 MFDPVILLSHRGSGFYAAHRIKSRNAKKMGRKGNWFSTVKKAFSPESKKKEDQKSSKSKKKWFGKQKLEISSDSYVGSEKTARSSAPPPEEIKSYDVENEASQSHVHEVATSVDSVRPIPAVQTAAVAIQAPKITRFAGRSREEVAAIKVQTAFRGYLARRALRALRGLVRLRTLMEGPIVKRQATSTLRSMQTLARVQSQIRSRRIRMFEENQALQRQLLHKHAKELESMRIGEEWDDSLQSKEQIEAKLLQKYEAAMRREKALAYAFTHQQTWKNSSRSINPMFMDPTNPSWGWSWLERWMAARTLESRSTMEKEMNDDRSSVRSCSRSITGGEISKSYARHQLNAEKHSPTPSQIPDSPSFQSYSTPSKPASRKLKKASPKNSFAMDDDIKSVAITQSARFRRHSIGGASVRDDESLASSPAVPSYMVATQSAKAKSRTQSPLAAENGTPQKEKGSFGTAKKRLSYPTSPARPWRHSSGPPKVENNLNAEITMGNGGAA 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1278 502 MobiDBLite consensus disorder prediction 313 336 - -
Lele07g1278 502 MobiDBLite consensus disorder prediction 43 65 - -
Lele07g1278 502 MobiDBLite consensus disorder prediction 40 65 - -
Lele07g1278 502 ProSiteProfiles IQ motif profile. 143 171 IPR000048 GO:0005515
Lele07g1278 502 MobiDBLite consensus disorder prediction 432 450 - -
Lele07g1278 502 MobiDBLite consensus disorder prediction 348 386 - -
Lele07g1278 502 MobiDBLite consensus disorder prediction 348 375 - -
Lele07g1278 502 Pfam IQ calmodulin-binding motif 146 164 IPR000048 GO:0005515
Lele07g1278 502 PANTHER IQ-DOMAIN 5-RELATED 29 472 - -
Lele07g1278 502 SMART iq_5 142 164 IPR000048 GO:0005515
Lele07g1278 502 MobiDBLite consensus disorder prediction 432 502 - -
Lele07g1278 502 Pfam Protein of unknown function (DUF4005) 416 483 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1278 Lele-ChrLele07 7740589 7743343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1278 29 502 IQD Protein Family AT5G03040 51.423 8.71e-148 429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1278 07 7740589 7743343 Lele14g1743 14 24546908 24553098 CCT
Lele07g1278 07 7740589 7743343 Lele15g0610 15 3574850 3576806 CCT
Lele07g1278 07 7740589 7743343 Lele16g0622 16 3483575 3491295 CCT
Lele07g1278 07 7740589 7743343 Lele07g1278 07 7740589 7743343 ECH
Lele05g1232 05 7710209 7712937 Lele07g1278 07 7740589 7743343 hybridization
Lele06g1097 06 6822036 6826112 Lele07g1278 07 7740589 7743343 hybridization