Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1269 ATGCAAATCTTCGTCAAAACCCTTACCGGCAAGACCATCACCCTTGAGGTAGAAATCTCTGACACCATCGATAACGTCAAAGCCAAGATACAGGACAAGGAAGGTATCCCTCCCGGTCAACAGCGTTTGATTTTCGCCTGTAAGCAATTGGAGGACGGTAGGACTCTTGCCGATTATAACATCCAGAAGGAATCCACTCTTCATCTGGTGCTTCGACTCCGTGGGGGAATGCATATTTTTGTGAAGACTCTGACTGGCAAGACGATCACTCTGGAGGTGGAGAGCTCGGACACCCTAGATGATGTCAAGGCAAAGATTCAGGACGAGGGAATTCCGCCTGACCAACAACGTCTGATCTTCGCTGGCAAACAACTTGAAGGTGGACGCACTCTCGCTGATTGTAACATTCAGGAATCTACCCTTCACCTTGTCCTGAGGCTGCGTGGTGGGGATGTGAAATGA 462 0.4935 MQIFVKTLTGKTITLEVEISDTIDNVKAKIQDKEGIPPGQQRLIFACKQLEDGRTLADYNIQKESTLHLVLRLRGGMHIFVKTLTGKTITLEVESSDTLDDVKAKIQDEGIPPDQQRLIFAGKQLEGGRTLADCNIQESTLHLVLRLRGGDVK 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1269 153 ProSiteProfiles Ubiquitin domain profile. 77 150 IPR000626 GO:0005515
Lele07g1269 153 SMART ubq_7 77 146 IPR000626 GO:0005515
Lele07g1269 153 SMART ubq_7 1 72 IPR000626 GO:0005515
Lele07g1269 153 FunFam Polyubiquitin 3 1 76 - -
Lele07g1269 153 PANTHER UBIQUITIN 1 80 - -
Lele07g1269 153 SUPERFAMILY Ubiquitin-like 76 150 IPR029071 -
Lele07g1269 153 CDD Ubl_ubiquitin 1 76 - -
Lele07g1269 153 Gene3D - 1 77 - -
Lele07g1269 153 Gene3D - 78 153 - -
Lele07g1269 153 FunFam Ubiquitin-60S ribosomal protein 77 151 - -
Lele07g1269 153 ProSiteProfiles Ubiquitin domain profile. 1 76 IPR000626 GO:0005515
Lele07g1269 153 Pfam Ubiquitin family 79 148 IPR000626 GO:0005515
Lele07g1269 153 Pfam Ubiquitin family 3 74 IPR000626 GO:0005515
Lele07g1269 153 SUPERFAMILY Ubiquitin-like 1 76 IPR029071 -
Lele07g1269 153 PRINTS Ubiquitin signature 53 74 IPR019956 -
Lele07g1269 153 PRINTS Ubiquitin signature 11 31 IPR019956 -
Lele07g1269 153 PRINTS Ubiquitin signature 32 52 IPR019956 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1269 Lele-ChrLele07 7700767 7701228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1269 1 77 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 94.805 2.29e-46 145