Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1266 ATGAGCGTCATCGACATTCTAACCAGAGTTGATTCGATCTGCAAGAAGTATGACAAATACGACATCGACAAGCACAAGGATTCCAATATCTCCGGCGATGATGCCTTTGCTCGACTCTACGCTGTAGTTGAAGCAGCCATCGAGGCGGCTCTTGAGAAAGCAGAAACTGCTTCCAAGGATAAAAGCAGGGCATCTGTTGTGGCCATCAATGCTGAGATTCGTCGTACTAAGGCTCGGTTGCTGGAGGAGGTCCCCAAGTTGCAGAGATTGGCTGTAAAGAAGTTAAAAGGGCTTTCACCAGAAGAATTTGCTGCTCGTAATGATTTAGTTCTTGCACTGCCAGAGAGGATCCATGCTATCCCAGATGGGACCCCTGCTGCACCCAAAAAAACAGGAGGTTGGGCTGCTTCTGCTTCACATACTGAAATTAGGTTTCATTCAGATGGTCAATTTGACGATGAATACTTTCAACAAACTGAGGAATCAAGTAAATTTCGGCAAGAGTTTGAAATGCGTAAAATGAAGCAGGCAAGTCATTTGGCCCAGGGAGGGGGTAGAGAATTTTGTTTGGATATGATTGCAGAAGGCTTGGATACATTGAAAAACATGGCACACGATATGAATGAGGAACTAGATAGACAAGTTCCATTGATGGATGAGATTGACGCTAAGGTGGACAAAGCATCATCTGACCTAAAGAATACCAATGTCAGGCTTAAAGACACAGTGAACCAGCTTCGATCCAGTCGAAATTTCTGTATTGACATTGTGCTGTTGATTATAATTTTGGGAATTGCTGCCTATTTATACAAGTAA 816 0.435 MSVIDILTRVDSICKKYDKYDIDKHKDSNISGDDAFARLYAVVEAAIEAALEKAETASKDKSRASVVAINAEIRRTKARLLEEVPKLQRLAVKKLKGLSPEEFAARNDLVLALPERIHAIPDGTPAAPKKTGGWAASASHTEIRFHSDGQFDDEYFQQTEESSKFRQEFEMRKMKQASHLAQGGGREFCLDMIAEGLDTLKNMAHDMNEELDRQVPLMDEIDAKVDKASSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLIIILGIAAYLYK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1266 271 Pfam SNARE domain 217 266 IPR000727 -
Lele07g1266 271 PANTHER SYNTAXIN 49 262 IPR045242 -
Lele07g1266 271 CDD SNARE_Qc 190 240 - -
Lele07g1266 271 Gene3D - 189 251 - -
Lele07g1266 271 SUPERFAMILY SNARE fusion complex 189 240 - -
Lele07g1266 271 FunFam Syntaxin 6 189 250 - -
Lele07g1266 271 ProSitePatterns Syntaxin / epimorphin family signature. 186 225 IPR006012 GO:0005484|GO:0006886|GO:0016020
Lele07g1266 271 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 190 242 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1266 Lele-ChrLele07 7671891 7673798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1266 1 270 SNARE and Associated Proteins AT3G09740 73.897 2.14e-146 409