Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele07g1258 | ATGGGTAACATAGGAAGTAGCAGCGCTAACGGCCGTCGGAGAAGCAATAGCAGACCGAGTCATCCGCCGCCGGCGGTTCGGCCGCAGCCAGAGATCGCTTCGAATCGGCCTGTTCATCCAGCATCTACACCTCAGACATCGCAACACCCAAACTCGGATCCTTCCCCGTATTTCCAGTACCCAGGTCACTATTCCGCTCCCCATCAGGCTATGCCTGCGCCTTTGCCGGCTCCTCTCGATCACCACCATCGCGCGAGGTCTCATCCACAAACGGACCCATCGTGGACGGGTGCAAGTTACCATGGCGGGCCTGCTATGCCTCCGCCTCCACCATATGTAGAGCATCAGAAGGCGGTTACCATAAGGAACGATGTTAATGTTAAGAAGGAGACTCTAAGGATTGAACCCGATGAGCAAAATCCTGGGCGGTTCCTTGTTGCATTCACATTCGATGCCACCGTTGATGGGAGCATCACCATTCTTTTCTTTGGTAAAGAAGATGATAGCTGCAAGCTCACACCAACGAAGCAAAATATTCTAGCCCCCGTAACTGTAAGTTTCCAGCAAGGTCTGGGCCAGCAGTTTAGGCAGCCAATTGGAACTGGTATTGACTTTTCAATCTTTGAGGAGTCAGAATTATCAGAAGTGGGTGGAATAGACGTGTTCCCTCTAGCAGTGAAGGCAGATGCATCCTGTGGTAAACAAGATGAATCAAATGAAAATTTAACATCTGGTAACAGAAACTCTCAGATAACTCTAGCAGCATTTGAGAAGGAGAAAGGGGAATTCCGGGTAAAGGTGGTTAAGCAGATCTTATGGGTAAATGAAATGAGGTATGTACTGCAGGAGATATATGGTATTGGAAATTCAGTGGAGAGTGACTTGGACGAGAATGATTCTGGAAAGGAGTGTGTCATCTGCCTCTCAGAGCCACGAGACACAACTGTTCTTCCCTGCCGACACATGTGCATGTGTAGTGGGTGTGCTAAGGTTCTGAGGTTTCAGACGAATAGATGCCCAATTTGCAGACAGCCAGTTGAGAGGCTTTTGGAGATAAAGGTCAATAATGATAACCCACCTGAGGAATGA | 1089 | 0.4885 | MGNIGSSSANGRRRSNSRPSHPPPAVRPQPEIASNRPVHPASTPQTSQHPNSDPSPYFQYPGHYSAPHQAMPAPLPAPLDHHHRARSHPQTDPSWTGASYHGGPAMPPPPPYVEHQKAVTIRNDVNVKKETLRIEPDEQNPGRFLVAFTFDATVDGSITILFFGKEDDSCKLTPTKQNILAPVTVSFQQGLGQQFRQPIGTGIDFSIFEESELSEVGGIDVFPLAVKADASCGKQDESNENLTSGNRNSQITLAAFEKEKGEFRVKVVKQILWVNEMRYVLQEIYGIGNSVESDLDENDSGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVNNDNPPEE | 362 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele07g1258 | 362 | MobiDBLite | consensus disorder prediction | 1 | 109 | - | - | |
Lele07g1258 | 362 | CDD | mRING-HC-C3HC5_MGRN1_like---blasttree | 303 | 343 | IPR045195 | - | |
Lele07g1258 | 362 | Pfam | Zinc finger, C3HC4 type (RING finger) | 302 | 348 | - | - | |
Lele07g1258 | 362 | ProSiteProfiles | Zinc finger RING-type profile. | 304 | 343 | IPR001841 | - | |
Lele07g1258 | 362 | MobiDBLite | consensus disorder prediction | 36 | 55 | - | - | |
Lele07g1258 | 362 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Lele07g1258 | 362 | SUPERFAMILY | RING/U-box | 303 | 349 | - | - | |
Lele07g1258 | 362 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 287 | 353 | IPR013083 | - | |
Lele07g1258 | 362 | FunFam | probable E3 ubiquitin-protein ligase LOG2 | 288 | 353 | - | - | |
Lele07g1258 | 362 | SMART | ring_2 | 304 | 342 | IPR001841 | - | |
Lele07g1258 | 362 | PANTHER | MAHOGUNIN | 1 | 355 | IPR045194 | GO:0061630 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele07g1258 | Lele-ChrLele07 | 7637187 | 7639345 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele07g1258 | 101 | 323 | C3H Transcription Factor Family | AT3G09770 | 62.445 | 2.70e-97 | 291 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele07g1258 | 07 | 7637187 | 7639345 | Lele07g1258 | 07 | 7637187 | 7639345 | ECH | |
Lele05g1213 | 05 | 7617177 | 7619920 | Lele07g1258 | 07 | 7637187 | 7639345 | hybridization | |
Lele06g1080 | 06 | 6734754 | 6736765 | Lele07g1258 | 07 | 7637187 | 7639345 | hybridization |