LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele07g1257	ATGGGATTGCGTAAACCTCCACCGAGTAACACCATTGATGAGGGACTGGAAGCTTGTCATAAAGCGGCAGCTGAGGAGTTGAACTTGATGCGATTTATCGTTAAAAATGCCTTTTCTTCTGTGAAAGAACCAGAGTTGACCTCCGACTCTAACATCTTCACAAAATTTAAGAGTTCAGACATGAAGATTCCTCGTTCATTTCTCTCCTGTTTCTCAGCAAAAGTCAAAGAACCAAAGCAGCTCGATGAGCCAGAAGGAGGCAGTGGTAGTGAAGCACTTCGTGTATTCTCTCGCAGCGAATTGAAATTAGCCACTCGTGGTTTCAATTCCTGGGACAAGATTGGAGAAGGCGGATTCGGTTCTGTTTACAAGGGCCAGCTTCGGAACGGCAATATCGTGGCCGTGAAAGTGCTTTCAATCGAACTGGAATCCATGCGAGGAGAAATGGAGTTCGTAGCAGAATTGGCTACAATGTCTCGTATCAAGCATGAAAATCTAGTTAATCTTCGAGGGTGTTGTGTGGAAGAAGCCCGGAGATATTTAGTCTTCGACTACATGGAAAACAATAGCCTCTCCCGCAGTTTTTTAGTCACAGAGGAAAGAAGGATGAAATTCAGATGGGAATTGAGGAGGAACATATCTATAGGGGTGGCTCGTGGCCTTGCCTATTTGCATGAGCAACTAAAACCACACATTGTTCATAGGGATATCAAGCCCAGCAACATCCTTCTCGATCAAAACTTCACACCAAAACTAGCTGACTTTGGTTTCGCCAAGTTATTTAGGGACGACAAGTCCTACGTCAGCACTAGAGTCGCAGGGACATTGGGCTATCTTGCTCCCGAGTATGCCACCACTGGAAAGTTGACGCGAAAATCCGATGTTTATAGTTTTGGAGTATTGATCTTACAAATTGTTAGCGGCCAAGCAGTAGTCGATGCTTATCGGGATGACGATCGTTTCCTAGTAGAGAAGGTGTGGGCAGCTTATAGAGCTAACGAGCTAGTAAAAATGGTGGACCCTGTGATTACAAATATCAACTTGGTAGAGGAAGAAGCCATTCGATTCCTAAAAGTGGGGCTGCTTTGCGTGCAAGAAACAGCTAAGCTTCGGCCAAGAATGACACAGGCCGTTGAAATGCTGAGTAGCAGCAGTAATAATAATGACATGGAAGGGGTTGTAATTTCAAAACCAGGGTTTGTTGCCGATCTCAGAAACATCAAAATAAGGCAGCAAATACCTGTACTAAGTCCCGAATCTATTTCAAGTGGAGCAAACCAGGGCATTTGGAGTTCGGTAATTGTCGCCCGTTAA	1314	0.4467	MGLRKPPPSNTIDEGLEACHKAAAEELNLMRFIVKNAFSSVKEPELTSDSNIFTKFKSSDMKIPRSFLSCFSAKVKEPKQLDEPEGGSGSEALRVFSRSELKLATRGFNSWDKIGEGGFGSVYKGQLRNGNIVAVKVLSIELESMRGEMEFVAELATMSRIKHENLVNLRGCCVEEARRYLVFDYMENNSLSRSFLVTEERRMKFRWELRRNISIGVARGLAYLHEQLKPHIVHRDIKPSNILLDQNFTPKLADFGFAKLFRDDKSYVSTRVAGTLGYLAPEYATTGKLTRKSDVYSFGVLILQIVSGQAVVDAYRDDDRFLVEKVWAAYRANELVKMVDPVITNINLVEEEAIRFLKVGLLCVQETAKLRPRMTQAVEMLSSSSNNNDMEGVVISKPGFVADLRNIKIRQQIPVLSPESISSGANQGIWSSVIVAR	437

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele07g1257	437	CDD	STKc_IRAK	114	381	-	-
	Lele07g1257	437	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	86	185	-	-
	Lele07g1257	437	FunFam	Cysteine-rich receptor-like protein kinase 2	186	389	-	-
	Lele07g1257	437	Gene3D	Transferase(Phosphotransferase) domain 1	186	396	-	-
	Lele07g1257	437	Pfam	Protein kinase domain	111	379	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele07g1257	437	Gene3D	Phosphorylase Kinase; domain 1	80	185	-	-
	Lele07g1257	437	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3	65	412	-	-
	Lele07g1257	437	ProSiteProfiles	Protein kinase domain profile.	108	400	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele07g1257	437	SUPERFAMILY	Protein kinase-like (PK-like)	90	381	IPR011009	-
	Lele07g1257	437	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	232	244	IPR008271	GO:0004672\|GO:0006468
	Lele07g1257	437	ProSitePatterns	Protein kinases ATP-binding region signature.	114	136	IPR017441	GO:0005524
	Lele07g1257	437	SMART	serkin_6	108	381	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele07g1257	Lele-ChrLele07	7633037	7636721	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele07g1257	95	403	Receptor kinase-like Gene Family	AT1G56120	46.452	1.24e-86	281

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Lele07g1257		Pkinase	1e-51	CL0016