Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1253 ATGGCCCAAGACCTCGAGGGAGCCGCTCCTCACAAGGACTACCATGACCCCCCTCCCGCTCCTCTCTTCGACGCCACCGAGCTCGGCAAGTGGTCCTTCTACAGGGCCGTCATTGCCGAGTTCGTCGCCACCCTCTTGTTCCTCTACATCACCGTCTTGACCGTTATTGGTTACAAAAGCCAGATCGACCCCGCTCACAAGGGAACCGACTGCGACGGCGTCGGCATTCTCGGCATTGCCTGGGCCTTTGGCGGCATGATTTTCGTCCTCGTCTACTGCACTGCCGGCATTTCTGGAGGACACATAAACCCGGCCGTGACGTTCGGGTTGTTCCTGGCGAGGAAGGTGTCGCTGATTAGAGCGATTACGTACATGGTGGCTCAGTGCCTGGGAGCCATATGTGGGTGTGGCTTGGTCAAGGCTTTCCAGAAGGCCTACTACAACAGGTATCAGGGTGGAGCCAACATGTTGTCTTCTGGCTACAGCAAAGGCACCGGTTTGGGGGCTGAGATTATAGGTACCTTTGTCCTTGTCTACACCGTCTTCTCCGCCACCGATCCCAAGAGAAATGCCAGAGACTCTCACGTTCCCGTGCTGGCTCCTCTTCCAATTGGATTTGCCGTTTTCATGGTTCACCTGGCCACCATCCCCATCACGGGCACCGGCATCAACCCGGCCAGGAGCTTTGGGGCCGCAGTCATGTACAACAATCAGATGGCATGGGATGACCACTGGATATTCTGGGTCGGACCCTTCATTGGCGCCGCCATCGCTGCAATTTACCACCAATACTTGTTGAGAGCTCAGGCGGCCAAAGCTCTGGGGTCTTTCAGGAGCAGCTCCAATTTGTAA 852 0.5646 MAQDLEGAAPHKDYHDPPPAPLFDATELGKWSFYRAVIAEFVATLLFLYITVLTVIGYKSQIDPAHKGTDCDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAITYMVAQCLGAICGCGLVKAFQKAYYNRYQGGANMLSSGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVMYNNQMAWDDHWIFWVGPFIGAAIAAIYHQYLLRAQAAKALGSFRSSSNL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1253 283 Pfam Major intrinsic protein 28 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele07g1253 283 TIGRFAM MIP: MIP family channel proteins 39 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele07g1253 283 ProSitePatterns MIP family signature. 101 109 IPR022357 -
Lele07g1253 283 CDD MIP 35 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele07g1253 283 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 8 277 IPR034294 -
Lele07g1253 283 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele07g1253 283 PRINTS Major intrinsic protein family signature 169 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele07g1253 283 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele07g1253 283 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele07g1253 283 PRINTS Major intrinsic protein family signature 245 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele07g1253 283 PRINTS Major intrinsic protein family signature 205 227 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele07g1253 283 Gene3D Glycerol uptake facilitator protein. 20 283 IPR023271 -
Lele07g1253 283 FunFam Probable aquaporin PIP1-2 20 281 - -
Lele07g1253 283 SUPERFAMILY Aquaporin-like 28 267 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1253 Lele-ChrLele07 7612744 7613958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1253 1 283 Major Intrinsic Protein MIP AT2G37170 81.404 1.02e-172 478