Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1246 ATGAATGTGATGCAACTTCCGCTTTCTCTTCACTCTGCATCAAGACGCAAGACGTTTGCTCTAGGTTTCAGTGGAGCGCTGTGGCTTCTGGTAGATCAAAATCTCTATGTATGTGAATTCATGTTTCAGGATAACCTTGAGCAAGATATATTGATGGATAGCATAGAAAGTCCCATGTCGACGAAGCCAGATTATAAGATAAAAGCAAGAAACATGTTGATGCAGAGAAAGAAACTTTCAAGGGTGTTTTCTGAGGATTATGATGCATCGAAAAGGAAGATATTCGATCCGAGGGGACCAAGAGTAAACAGATGGAACAAAATGTTCTTAGTAGCATGCTTGATTTCACTATTTGTGGATCCCTTCTTCTTTTACTTGCGAGAGGCTAAGACAGACAAGTGCATTGCTATATCTGTGGGACTCGAAGTTTCGCTCACCACAATTCGGTCCTTGGTTGATGCATTTTACATCATTCATATATTTATTCGGTTTCAAACTGCTTACGTTGCTCCTTCCTCTCGGGTTTTTGGTAGAGGGGAGCTTGTTATTGACCCTTCAAAGATTGCATCAAGATACCTCCAAAAGGACTTCTGGCTTGATCTTCTTACAGCCCTCCCTCTTCCCCAGGTGTTGATTATAGCTGTAATTCCAAATCTAAGGGGGTCACAAATGATTGCTTCAAGGCAGAGTCTGCGACTTGTGATCATTGTCCAATACTTGTTAAGGTTATATCATATCTTCCCTCTTTCATCTGAAATAGTAAAGGCAAATGGAGTAATGATGGAAAAAACCTGGGCTGGGGCAGCTTATAACCTTATGCTTTATATGCTAGCAAGTCATGTCTTAGGATCCTCCTGGTACCTGTTGGCAATCGAAAGGCAAGATGAATGTTGGAAAAAAGCTTGTAATCTGGAGTTCCCATATTGTCAATACCGTTATCTTGACTGTCAGAGTATAAGTGATACCGCCAGAGCAGCTTGGTTTAGATCAAGCAACCTGTCAAGTTTATGTGATAAGAACAGTGATTTCTTTCATTTTGGTATTTTTGCCGATGCTCTCACTCTGGAAATGGCGGACTCAAAGTTCTTAAGCCGATATTATTATTGTCTTTGGTGGGGCCTGCGGAATCTCAGCTCTCTGGGACAGAATCTCCTAACCAGCACTAACGTTGGAGAGATAAATTTTGCAGTGATTATTGCAATTCTTGGGTTGGTGCTTTTTGCACTCCTAATAGGAAATATGCAAACGTACCTGCAATCAACTACTTTGCGGCTGGAAGAGTGGAGAATAAGACGCACAGATACAGAACGATGGATGCATCATAGGCAGTTACCTCATTACTTGAAGCAAAGTGTGAGACGCTACGAGCAATTCAGATGGGTTGCTACGAGGGGAGTTGACGAGGAATCCATCCTTCGAGACCTCCCTGTCGATATCAGACGCGACATCAAACGCCACCTGTGTCTCAACCTAGTTCGACAAGTACCACTGTTTGATCAGATGGACGAGAGAATGCTAGACGCAATATGTGAGAGACTGAAACCTTGTCTGTGTGTTCAAGGAACGCTCCTAGTTCGCGAAGGAGATCCTGTGACTAAAATGCGCTTTATCATTCGAGGACGTCTAGATTCTTGTACCACTAACGGTGGCAGAACCGGGTTCTTCAACTGTTGCAGAATCGGACCGGGTGATTTCTGTGGCGAGGAGCTATTGCCATGGGCTCTGGACCCGCGTCCAAGTGCAGTCCTTCCTTCTTCAACTCGCACAGTGAAAGCCCTAACAGAAGTGGAAGCTTTCGCACTTATAGCCGAAGACTTGAAATTTGTGGCGGCTCAGTTCAGGAGGCTACACAGCAAGCAACTGAGGCACACGTTTAGGTCTCACTCTCATCAATGGAGGGCATGGGCTGCTTGCTTCATACAAGCGGCTTGGTTTAGATATAAGAGAAGAAAAGAAGCGAGTGAGCTAATTAATCATGAGGATGTTAGTGAAACTAAGGTGGAACATTTCTCTGCGCCTTTGCACTTGCAACCTCGGATAGGGTCGAGCACTACAATGTATAAAGCGGCCAACTTGGGATGTACCCCAAGGAAAGGTGGAAGCTTGCGATATGGTTCTGAACTTGATATTATTGGTTCACTCATCAGGAAGCCCCTCGAGCCTGACTTCAGCACTGTTGAAGATTGA 2187 0.4422 MNVMQLPLSLHSASRRKTFALGFSGALWLLVDQNLYVCEFMFQDNLEQDILMDSIESPMSTKPDYKIKARNMLMQRKKLSRVFSEDYDASKRKIFDPRGPRVNRWNKMFLVACLISLFVDPFFFYLREAKTDKCIAISVGLEVSLTTIRSLVDAFYIIHIFIRFQTAYVAPSSRVFGRGELVIDPSKIASRYLQKDFWLDLLTALPLPQVLIIAVIPNLRGSQMIASRQSLRLVIIVQYLLRLYHIFPLSSEIVKANGVMMEKTWAGAAYNLMLYMLASHVLGSSWYLLAIERQDECWKKACNLEFPYCQYRYLDCQSISDTARAAWFRSSNLSSLCDKNSDFFHFGIFADALTLEMADSKFLSRYYYCLWWGLRNLSSLGQNLLTSTNVGEINFAVIIAILGLVLFALLIGNMQTYLQSTTLRLEEWRIRRTDTERWMHHRQLPHYLKQSVRRYEQFRWVATRGVDEESILRDLPVDIRRDIKRHLCLNLVRQVPLFDQMDERMLDAICERLKPCLCVQGTLLVREGDPVTKMRFIIRGRLDSCTTNGGRTGFFNCCRIGPGDFCGEELLPWALDPRPSAVLPSSTRTVKALTEVEAFALIAEDLKFVAAQFRRLHSKQLRHTFRSHSHQWRAWAACFIQAAWFRYKRRKEASELINHEDVSETKVEHFSAPLHLQPRIGSSTTMYKAANLGCTPRKGGSLRYGSELDIIGSLIRKPLEPDFSTVED 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1246 728 FunFam Cyclic nucleotide-gated ion channel 1 495 613 - -
Lele07g1246 728 Gene3D Jelly Rolls 495 615 IPR014710 -
Lele07g1246 728 Gene3D Helix hairpin bin 425 488 - -
Lele07g1246 728 SUPERFAMILY cAMP-binding domain-like 427 619 IPR018490 -
Lele07g1246 728 SMART cnmp_10 497 628 IPR000595 -
Lele07g1246 728 ProSiteProfiles cAMP/cGMP binding motif profile. 497 582 IPR000595 -
Lele07g1246 728 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 79 678 - -
Lele07g1246 728 Pfam Ion transport protein 105 424 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele07g1246 728 Gene3D - 108 421 - -
Lele07g1246 728 PRINTS EAG/ELK/ERG potassium channel family signature 366 383 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele07g1246 728 PRINTS EAG/ELK/ERG potassium channel family signature 277 287 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele07g1246 728 PRINTS EAG/ELK/ERG potassium channel family signature 392 403 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele07g1246 728 PRINTS EAG/ELK/ERG potassium channel family signature 410 419 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele07g1246 728 PRINTS EAG/ELK/ERG potassium channel family signature 160 169 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele07g1246 728 PRINTS EAG/ELK/ERG potassium channel family signature 460 467 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele07g1246 728 SUPERFAMILY Voltage-gated potassium channels 96 419 - -
Lele07g1246 728 CDD CAP_ED 497 626 IPR000595 -
Lele07g1246 728 FunFam Cyclic nucleotide-gated ion channel 1 424 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1246 Lele-ChrLele07 7557062 7561053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1246 69 725 Ion Channels AT2G28260 64.231 0.0 878