Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1238 ATGAAGAGAGAGTTTCTGAGAGTGTGGCTTAACAAGTGGAAGAAAATGAAGAGTCGAGTGATACCTTGTTGTGCCTGTGAGCGTTGCAGTAAATGGGCTTTTTGGTCGTTCATGCATGAAGGAAGATCGATCCCAAGTGATGTCCCAAAGGGTCACCTTGTCGTGTATGTAGGGGAGAATTTCAAGAGATTTGTAATCAAGGTCACATTACTGAAACATCCACTCTTCAAGGCATTGCTGGATCAAGCTCGGGAAGAGTACGATTTTGTTTCTTATTCAAAACTTTGCATCCCTTGCGACGAGCGTCTTTTCCTCAGTGTCCTTCGCTGTGCTAGCTCTCCCAAGAACGAAGGAGCGAGTCTTTGTATTTGA 372 0.4462 MKREFLRVWLNKWKKMKSRVIPCCACERCSKWAFWSFMHEGRSIPSDVPKGHLVVYVGENFKRFVIKVTLLKHPLFKALLDQAREEYDFVSYSKLCIPCDERLFLSVLRCASSPKNEGASLCI 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1238 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 106 IPR003676 GO:0009733
Lele07g1238 123 Pfam Auxin responsive protein 12 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1238 Lele-ChrLele07 7502224 7502595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1238 31 113 Calmodulin-binding Proteins AT4G34750 43.182 2.10e-20 79.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1238 07 7502224 7502595 Lele07g1238 07 7502224 7502595 ECH
Lele05g1192 05 7484807 7485178 Lele07g1238 07 7502224 7502595 hybridization
Lele06g1062 06 6599526 6601365 Lele07g1238 07 7502224 7502595 hybridization