Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1234 ATGGGAGGCTCAGATACGCCGCTAAGTTTTCATCTCCTTTCTGAAAATGCAGATCAATACGTTGCAATGAAGTGTTTTCCATTCCACTATGGAGAGAAGAAGGAAGAACCACCGATAAGCGTGAAGTCATCTTCGGGTCGTTCCAACAGTTCCACAAATGCTGAGGATGCTGTGAGAAGATCTGGTTCTGAATTGAATTCCAAGGATCAGTCAGAAAACAGTGCAGAGTCCCTTAGGAGGACTGCATTACCCAGTTTGTCTCAAAGACCCAGCAACCTGAAAATTTTCACTGTTCCTGAACTAAAATCAGCCACAAAGAATTTCAGTCGCTCTGTTATGCTTGGAGAGGGAGGGTTTGGATGTGTATTCAAGGGATTGATCAAGAGTGGAGAGGATCCTAACAGAAAACTTGAAGTTGCAGTTAAACAACTTGGTAAAAGAGGAGTGCAGGGCCATAAGGAATGGGTGACAGAAGTTAATGTTCTGGGCATTGTTGAGCATCCCAATCTGGTAAAACTAGTGGGTTACTGTGCGGATGATGACGAAAGAGGAATCCAGCGGCTTCTGATTTATGAATATATGCCCAACAGAAGTGTGGAACACCACTTATCACCCAGTTCAGAGAATCCTCTCTCATGGAGTAGAAGACTGAAAATAGCTGAAGATGCAGCTCGTGGCTTAACATACCTGCACGAGGAAATGGATTTTCAGATAATCTTCAGAGACTTCAAATCTTCAAACATCCTTCTGGATGAGCGTTGGAATGCAAAGCTATCAGACTTTGGGTTAGCTAGATTGGGACCACCTGAAGGATTAACTCATGTCTCAACAGCGGTTGTGGGAACAATGGGATATGCGGCTCCTGAATATGTTCAAACTGGCCGTCTGACATCCAAGAGTGATGTATGGAGCTATGGTGTCTTCCTTTATGAAATCATTACTGGCCGGCGCCCTTTTGATCGAAATCGTCCAAAGGGTGAGCAGAAGCTCTTGGAATGGGTGAGGCCATACTTACCACATGGGAAGAAATTTCAACTAATATTGGATCCAAGGCTTGAAAGGAAACACGTTTTTAAGTCAGCTCAAAGACTTGCTATTGTAGCTAACCGATGTTTAGTAAAGAACCCAAAGAATCGCCCTAAGATGAGTGAGGTATTGGATATGGTGAATCAGATTGCACAATCTTCATTGAGTACAAGTCCAGAGCTACCCCTGAAGAATTTTGCATCAGCTCAAGCGTCGCAAGAAACCAAATTAAAGAACAAGAGAAGGATTATGGACCTGAAACATGGAGAAACTAATTGGTTTTTCAGGATATGGAGACCGAAACATCAAAGAGCGAGTTGA 1347 0.4328 MGGSDTPLSFHLLSENADQYVAMKCFPFHYGEKKEEPPISVKSSSGRSNSSTNAEDAVRRSGSELNSKDQSENSAESLRRTALPSLSQRPSNLKIFTVPELKSATKNFSRSVMLGEGGFGCVFKGLIKSGEDPNRKLEVAVKQLGKRGVQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSPSSENPLSWSRRLKIAEDAARGLTYLHEEMDFQIIFRDFKSSNILLDERWNAKLSDFGLARLGPPEGLTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYEIITGRRPFDRNRPKGEQKLLEWVRPYLPHGKKFQLILDPRLERKHVFKSAQRLAIVANRCLVKNPKNRPKMSEVLDMVNQIAQSSLSTSPELPLKNFASAQASQETKLKNKRRIMDLKHGETNWFFRIWRPKHQRAS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1234 448 Gene3D Phosphorylase Kinase; domain 1 81 193 - -
Lele07g1234 448 PANTHER OS01G0588500 PROTEIN-RELATED 66 393 - -
Lele07g1234 448 FunFam Serine/threonine-protein kinase BIK1 74 193 - -
Lele07g1234 448 MobiDBLite consensus disorder prediction 41 60 - -
Lele07g1234 448 ProSiteProfiles Protein kinase domain profile. 108 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1234 448 FunFam Serine/threonine-protein kinase PCRK2 194 402 - -
Lele07g1234 448 CDD STKc_IRAK 114 392 - -
Lele07g1234 448 MobiDBLite consensus disorder prediction 34 84 - -
Lele07g1234 448 Pfam Protein kinase domain 110 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1234 448 SUPERFAMILY Protein kinase-like (PK-like) 84 389 IPR011009 -
Lele07g1234 448 Gene3D Transferase(Phosphotransferase) domain 1 194 407 - -
Lele07g1234 448 MobiDBLite consensus disorder prediction 67 84 - -
Lele07g1234 448 ProSitePatterns Protein kinases ATP-binding region signature. 114 142 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1234 Lele-ChrLele07 7484361 7487486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1234 23 402 Glycoside Hydrolase AT3G07070 42.821 4.95e-92 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele07g1234 Pkinase 9.3e-47 CL0016