Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1205 ATGGCGGTTCCAGGGAGGCGCAATGGTCTAAACGATGACGACGACGACGACGACGACAACTTCGAAGATGACAACGCCCTCTTTGAAGAAAATGGTCTGTTGGAGCTTGATGATTCGGATACGCCTCCTTATCTCCGCGACCTAGCCGTCGCCTCTCAGTTTGGTGACCTCGATAACCTCCGCCTTGCTCTAGATAACTTGACTGGAAGCATTGATGAACCTGTGGAAGATGGGGATACGGCCCTACATCTGACCTGCTTATACGGCCATTTATCGTGTGTTCAGCTACTTCTGGAAAGAGGAGCGAACATGGAGTCTAAGGATGAAGACGGTGCAATTCCATTACATGATGCTTGTGCAGGAGGGTATGCTGAGATAGTCCAATTGCTACTTAACAGAGCTGATAATGCAGAGCATATAAGGAGGATGCTTGAATCAGTTGATTCAGAGGGCGATACACCGCTCCATCACGCTGCTAGAGGCGAGCATGTTGATGTCATTAGGTTGTTGCTGTCTCATGGCGCATCTCCCACAAAGGCAAACTTATATGGAAAGACACCAGCAGAATTACCTGATCATGGCACAGACGCAAGGAGATTGCTGGAAGCCGCTGGGGCTACTTCCATGCCATCTCACTAA 639 0.4945 MAVPGRRNGLNDDDDDDDDNFEDDNALFEENGLLELDDSDTPPYLRDLAVASQFGDLDNLRLALDNLTGSIDEPVEDGDTALHLTCLYGHLSCVQLLLERGANMESKDEDGAIPLHDACAGGYAEIVQLLLNRADNAEHIRRMLESVDSEGDTPLHHAARGEHVDVIRLLLSHGASPTKANLYGKTPAELPDHGTDARRLLEAAGATSMPSH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1205 212 SMART ANK_2a 77 106 IPR002110 GO:0005515
Lele07g1205 212 SMART ANK_2a 110 139 IPR002110 GO:0005515
Lele07g1205 212 SMART ANK_2a 150 179 IPR002110 GO:0005515
Lele07g1205 212 SUPERFAMILY Ankyrin repeat 48 189 IPR036770 -
Lele07g1205 212 FunFam BRCA1-associated RING domain protein 1 42 209 - -
Lele07g1205 212 Gene3D - 42 208 IPR036770 -
Lele07g1205 212 MobiDBLite consensus disorder prediction 1 24 - -
Lele07g1205 212 ProSiteProfiles Ankyrin repeat region circular profile. 77 109 - -
Lele07g1205 212 Pfam Ankyrin repeats (3 copies) 48 135 IPR002110 GO:0005515
Lele07g1205 212 ProSiteProfiles Ankyrin repeat profile. 110 142 IPR002110 GO:0005515
Lele07g1205 212 PANTHER SOWAH (DROSOPHILA) HOMOLOG 45 208 - -
Lele07g1205 212 Pfam Ankyrin repeat 151 180 IPR002110 GO:0005515
Lele07g1205 212 ProSiteProfiles Ankyrin repeat region circular profile. 110 133 - -
Lele07g1205 212 ProSiteProfiles Ankyrin repeat profile. 77 109 IPR002110 GO:0005515
Lele07g1205 212 ProSiteProfiles Ankyrin repeat profile. 150 182 IPR002110 GO:0005515
Lele07g1205 212 ProSiteProfiles Ankyrin repeat region circular profile. 150 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1205 Lele-ChrLele07 7306382 7309103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1205 76 193 Ion Channels AT2G25600 32.653 1.69e-12 63.9