Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1199 ATGTCTCGTACTATTCTTCATACATTGCCCCTTGTCTCGATCGATGGTACGCTACTTGACACTTTGCAGTCTCCGGTGCCGCCTTGTGGAGCAAAAGATATGGGCAAGTTGAACCCATCCACATTACTCACGGCATATAAATCTTGTCCACCGTTCGCCGGCACCGTAATTTCTGCCAACGTTGCTGGTGCAAAGAAGTCTTGTGAAGTTGTTTTCTCTGTTTTACAAGATGCATTCATTGATGGTGATCTCTCAGTTCCTGAGGCTGTGGAAGCTGCTAAAGACATCTTAGCAAAAAATGCAATCCACTTTTACAAGATTCAATCAGCCATTGGTACTATCACTTCACACAACAACTTGTCCCGAAAGTCAAATATTGCCTTAGAGGCTGAATTGTCACTTGTTCGTCTCATGTGGATCGATATTTCTGGACAGCATAGATGCCGTGTGAGATTACATCAAGCCTATTTCTATGCTTTTCTTGTTCCTGTCCTACACGGGAACCTTTCATTTGGGAACTTGAGGAGAAAACTGCAGAAGAATGTTGTTTCAGGAAAGCGTTTCAATGATGTTGTTAAGGAGCGTGGCGTTGGTATGGCAAGTGCTTGCATAGCAATGCCTTCTTTTCTAGATACAACAGTAGAAGGGTCTGGGTTGAATGCAGTTGGTGAAGTAACCCTAATGCCTGATTTGTCTTCAAAAAGCAGAATTCCTTGGAGAAAGCAAGAGGAAATGGTTTTATGTAATTTGCAAACTAAACCAGGTGAAGCATGGGAATATTGCCCAAGGGAGGCCTTAAGAAGAGTTTTAAAGATTCTGAAAAATGAATTTGACTTGGTATGGTTTAAAGCTAGTCTTGCTTGCGAGGCAGGGAATACAGGGTTTGAGAATGAATTTTATCTCTTGAAGAGTGTAACTAGGGAAGGGAAAGAAGAATGGATGCCAATTGACTCGACTCGTTACTCCTCCACATCTGCATTTGATGCCACAGCCCCCATATTTCAGGAAGTCATTGCTGCTCTTCATTCCTTTTGTATTTTTGTGGAACAGGTCCATGCAGAAGCCGGAAAAGGTCAATTTGAATTGATTCAGAGCTATACGGCATTTGCTGTAGCTGCGGATGAGTTAATCTACACTCGTGAGGTTATTAAGGCAATTGCAAGAAAGCATGGGTTGCTGGCAACTTTTATGCCAAAGTGCTTTTTGGATGACATTGGCTCTGGAGCTCATGTGCATATTAGCCTGTCACAGAATGGTCAAAACGTATTTATGGCATCCGATGCATCGTCCAAATATGGAATATCGTCTATGGGAAAGGAATTCATGGCAGGAGTTCTGCATCATCTTCCTTCAATTTGGTTGGCACCTTCTCTATCCTTCTTTAGTACTAATTATCTGGTTTTTGTGATACTTGACCCCTGTAGTTACCAGCGTCTGCAACCCAATACGTGGAGCGGTGCATTCAAGTGCTGGGGAAATGAAAATAAAGAAGCGCCGCTGAGAGCTGCATCTCCGCCTGAGATTCCTGATGGTCCAGTCAGTAACTTTGAGATTAAATCATTCGACGCTACTGCAAATCCACATCTAGGCTTGGCCGCTACTGTTGCTGCTGGAATTGATGGCCTTCGTAGGCATCTTTCTCTTCCTGAACCTGTTGGTAAGATTCTGGATTTGTTTCCAATGAGTTGTTATTCTTTTTCTCTCGTTATTTTACCGGATTACCATAATGATTGGGATCCTTATAATCTTCAGAATTCCAAATATGCATCTAAGATTCTTTTCCCTCCAATATATATTTTGCATAAAACAGATACAGATCCAGGGAACTATCCGGATAAACTTCAGAGGTTGCCAAGTGCACTTTCTGAAACTTTTGATAAAGATGATGACATCTTTAAGGAATTAATTGGTGAAAAGCTGCTTACTGCAAGGAAAGCACTTCGAAAGTTTTCCGTTAATGCGGAGTTGTGGACTCTACTTATAATGGGAGGAGCATGTGGGTACGAGGATGTAGTGAAAGCAGGATATGGACTTGAGACAGCAGCATTGAGCCCAGTTCTTTACAAGGAAGGAGCCACATGTGATCCTTGCTACGAAATCCAATGCGTGAACTCACCATGGTGTAAACACATAAAACCTTCCATTTTCGTGACGGCCCCCGATTATTGCCCTCCCAATTTCAACCTCCCCAGCGACAATGGAGGATGGTGCAACCCTCCGCGCGAACACTTCGACTTAGCCAAGCCCTCTTACCTTGACATTTATTGCCGAATTGAGATTGAGAATGAGTTGAAATGCAGGAGCCAAGGAGGCATCAGAACAAGTGATGGAAGGGCCTTCACTTCGTGGCACGTCACTCCTGAGAATTGGCAGTTTGGGATTGCCCTACGAAGGCAAAAACTTCAAGTGAATTGCTTCTCTCAACCATGGGGCCTTGGTTTGTACATATAA 2451 0.4321 MSRTILHTLPLVSIDGTLLDTLQSPVPPCGAKDMGKLNPSTLLTAYKSCPPFAGTVISANVAGAKKSCEVVFSVLQDAFIDGDLSVPEAVEAAKDILAKNAIHFYKIQSAIGTITSHNNLSRKSNIALEAELSLVRLMWIDISGQHRCRVRLHQAYFYAFLVPVLHGNLSFGNLRRKLQKNVVSGKRFNDVVKERGVGMASACIAMPSFLDTTVEGSGLNAVGEVTLMPDLSSKSRIPWRKQEEMVLCNLQTKPGEAWEYCPREALRRVLKILKNEFDLVWFKASLACEAGNTGFENEFYLLKSVTREGKEEWMPIDSTRYSSTSAFDATAPIFQEVIAALHSFCIFVEQVHAEAGKGQFELIQSYTAFAVAADELIYTREVIKAIARKHGLLATFMPKCFLDDIGSGAHVHISLSQNGQNVFMASDASSKYGISSMGKEFMAGVLHHLPSIWLAPSLSFFSTNYLVFVILDPCSYQRLQPNTWSGAFKCWGNENKEAPLRAASPPEIPDGPVSNFEIKSFDATANPHLGLAATVAAGIDGLRRHLSLPEPVGKILDLFPMSCYSFSLVILPDYHNDWDPYNLQNSKYASKILFPPIYILHKTDTDPGNYPDKLQRLPSALSETFDKDDDIFKELIGEKLLTARKALRKFSVNAELWTLLIMGGACGYEDVVKAGYGLETAALSPVLYKEGATCDPCYEIQCVNSPWCKHIKPSIFVTAPDYCPPNFNLPSDNGGWCNPPREHFDLAKPSYLDIYCRIEIENELKCRSQGGIRTSDGRAFTSWHVTPENWQFGIALRRQKLQVNCFSQPWGLGLYI 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1199 816 Pfam Lytic transglycolase 680 752 IPR009009 -
Lele07g1199 816 Pfam Glutamine synthetase, catalytic domain 260 553 IPR008146 GO:0004356|GO:0006807
Lele07g1199 816 SMART dpbb_1 680 755 IPR007112 -
Lele07g1199 816 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 262 649 - -
Lele07g1199 816 PANTHER GAMMA-GLUTAMYLPUTRESCINE SYNTHETASE 61 652 - -
Lele07g1199 816 SUPERFAMILY Glutamine synthetase/guanido kinase 259 554 IPR014746 GO:0003824
Lele07g1199 816 ProSiteProfiles Glutamine synthetase (GS) catalytic domain profile. 262 665 IPR008146 GO:0004356|GO:0006807
Lele07g1199 816 PRINTS Expansin signature 675 689 IPR002963 GO:0009664
Lele07g1199 816 PRINTS Expansin signature 715 725 IPR002963 GO:0009664
Lele07g1199 816 PRINTS Expansin signature 734 751 IPR002963 GO:0009664
Lele07g1199 816 Gene3D - 179 255 IPR036651 GO:0004356|GO:0006542|GO:0006807
Lele07g1199 816 SMART Gln_synt_C_2 259 538 IPR008146 GO:0004356|GO:0006807
Lele07g1199 816 Gene3D - 650 767 IPR036908 -
Lele07g1199 816 SUPERFAMILY Barwin-like endoglucanases 661 777 IPR036908 -
Lele07g1199 816 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 663 779 IPR007112 -
Lele07g1199 816 Gene3D - 55 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1199 Lele-ChrLele07 7267033 7276585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1199 662 773 Expansin Gene Family AT3G55500 55.085 2.23e-37 139