Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1187 ATGAACAGCAACAGCAACAACGTTGAAGGCCAAGGCCAAGTAGGCTACTTTGCCAACCCTCTCATCATCTCCGGCGCCGGCATCATCTGCTCCTGCGTCGCCTTAGCCACCTACCACTTCATCCTCTTCAGGCTCTGCCTTCAAGGCCGACGACAATTGCCGCAAATCGCCCAGCCAATAAGTCCCCCCGCCGATGACATTCCCTGCGGCGTCGATCCTGAAATCCTCAAGAAAATCCCAATCCTGCCTTACTTTCACAAGAAAGACGATGCCTTTCGTTTGGATCAAACTGAATGCGCGATTTGCTTGGGCGAATTGCAGGATGGAGAAAAGGTTCGACTATTGCCTTCTTGTAGCCATGCTTTTCACTTACCTTGTATCGATCTCTGGTTCGCTCAGAATTCCAATTGTCCCATTTGTCGAGCGCCGTTAGTTATAGCCCCTGAGCCGTCCCCTCCGGTAGCTTCAGAAAGTGTTGTTGATGCTCAGGAAATAAGGGTGTGTCATCAAAGTGATCATCATAATAATAAGATCGTTGCTTCTGATCTTTTGATGAGTGCTTCTGGTTCGACGTTACGAGGAGGCCATCTTCGCTCGGCCACGTTTCAGCACTCTCTCTCTCTGGCGTATCGTCACGAGCAGGAAAAGCGTCAGGATTTGATAAAGACGGGGATGAAGAGGTCTCTGTCCATGGATCATTCGTCGTATGTTTCTGTCAGCATACAAAGAGACGAGGAAAATAATAAATCTGCTTCTTCTTCTTCGCCCTCTGTTGCTACAGGGATTGGGATTGCGCATGCTAAAGCGCTTGATCAGGTGTCGTCCATGTTGATGATGTCTTTCGCGCAGTTTTGGAACAGTAGAAATGAGAGATCCAAAGGCATTCTACCGAATTGA 897 0.4872 MNSNSNNVEGQGQVGYFANPLIISGAGIICSCVALATYHFILFRLCLQGRRQLPQIAQPISPPADDIPCGVDPEILKKIPILPYFHKKDDAFRLDQTECAICLGELQDGEKVRLLPSCSHAFHLPCIDLWFAQNSNCPICRAPLVIAPEPSPPVASESVVDAQEIRVCHQSDHHNNKIVASDLLMSASGSTLRGGHLRSATFQHSLSLAYRHEQEKRQDLIKTGMKRSLSMDHSSYVSVSIQRDEENNKSASSSSPSVATGIGIAHAKALDQVSSMLMMSFAQFWNSRNERSKGILPN 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1187 298 SUPERFAMILY RING/U-box 91 149 - -
Lele07g1187 298 MobiDBLite consensus disorder prediction 236 258 - -
Lele07g1187 298 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 146 IPR013083 -
Lele07g1187 298 CDD RING-H2_PA-TM-RING 98 141 - -
Lele07g1187 298 Pfam Ring finger domain 98 141 IPR001841 -
Lele07g1187 298 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Lele07g1187 298 SMART ring_2 99 140 IPR001841 -
Lele07g1187 298 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 17 164 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1187 Lele-ChrLele07 7158100 7158996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1187 27 252 C3H Transcription Factor Family AT5G17600 27.273 9.07e-25 100