Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1171 ATGGATTGGGATTGGAATATAAAACCTTCTGTTCCTCAAGCCGAGTCTTCCTTTGGCTTCCTCTATAACTTTAACTGCAGTTCATATCCAGGAATGGAAGTGAAACATACAGCGATGACGGAGAGTGAGAGACAAGGGTTGGCTCCGGGAATGGACAGAGAACAGAAGACGACGAAGAAGAAGAAGAGATTAACAAGCAAGCAGGTTGAGTTACTGGAGAAGAGTTTCGAGAAGGAGAAAAAATTGGACTCAGAGAGGAAGATGAAGCTTTCGAAGGAGGTAGGGTTGCAGCCTCGCCAAGTTGCGGTTTGGTTCCAAAATAGGAGAGCTAGGTGGAAGGCAAAGCAGCTTGAGAACTTGTATGATGCTCTCAAGCAGGAGTTTCATGCCATCTACAAGGAAAAACAGAAGCTTCAAGAAGAGGTTATGATATTAAAAGCCATGTTGAGAAAGCAAGAATCTAGTACGCAGGCATCATCTGCAGATTATCTGCAACTCTGGGGATGA 507 0.4438 MDWDWNIKPSVPQAESSFGFLYNFNCSSYPGMEVKHTAMTESERQGLAPGMDREQKTTKKKKRLTSKQVELLEKSFEKEKKLDSERKMKLSKEVGLQPRQVAVWFQNRRARWKAKQLENLYDALKQEFHAIYKEKQKLQEEVMILKAMLRKQESSTQASSADYLQLWG 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1171 168 ProSiteProfiles 'Homeobox' domain profile. 55 115 IPR001356 GO:0003677
Lele07g1171 168 CDD homeodomain 63 116 IPR001356 GO:0003677
Lele07g1171 168 MobiDBLite consensus disorder prediction 40 64 - -
Lele07g1171 168 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 48 157 IPR045224 GO:0003700
Lele07g1171 168 Pfam Homeodomain 59 113 IPR001356 GO:0003677
Lele07g1171 168 PRINTS Lambda-repressor HTH signature 86 95 IPR000047 GO:0003677
Lele07g1171 168 PRINTS Lambda-repressor HTH signature 95 111 IPR000047 GO:0003677
Lele07g1171 168 Pfam Homeobox associated leucine zipper 115 149 IPR003106 GO:0006355|GO:0043565
Lele07g1171 168 Gene3D - 38 120 - -
Lele07g1171 168 FunFam homeobox-leucine zipper protein ATHB-6-like 63 109 - -
Lele07g1171 168 MobiDBLite consensus disorder prediction 47 64 - -
Lele07g1171 168 Coils Coil 107 155 - -
Lele07g1171 168 SMART HOX_1 57 119 IPR001356 GO:0003677
Lele07g1171 168 ProSitePatterns 'Homeobox' domain signature. 90 113 IPR017970 GO:0000981|GO:0006355
Lele07g1171 168 SUPERFAMILY Homeodomain-like 43 117 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1171 Lele-ChrLele07 7075333 7076096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1171 7 145 Homeobox Transcription Factor Family AT5G03790 49.660 3.63e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele07g1171 Homeodomain 1.6e-17 CL0123