Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1169 ATGGAACCCAATGGACTTGGTGGTGGAATGTTTTCTAGCGTCAGTTCTGGTTTGCTTGGAGTAGAAAATCCGTTACAACAGCAGCAGCAGCAACAAAACCTGTCGAATCCTCAAAATCCTCATCCTATGCATCATTCTCAAATGGTTTCTTACGCTTCTTCGCACCATGAAACTGATATTCCTCAAGCACCGACCCAACAATCGATCAAGCATGGGTACCCTTATTCGGCAAAGATCAATCAACAAATGGCTCTCAGTGACGATGATGAAGGCGGTTTTGGAGCAGAGGACAACGTTAGCTCTGGAGAAAAGAGGAAAGTGTCGCAGTGGCACAGAATGAAGTGGACGGATACTATGGTTAGGCTCTTGATAATGGCGGTTTATTACATTGGCGATAATGAAGGGGGTTCAGAAGGGGCTGATAAGAAGAAACCTGCGGGTCTGCTGCAGAAGAAAGGCAAGTGGAAATCGGTGTCAAGGGCTATGATGGAGAAGGGTTTTTTCGTGTCTCCTCAGCAATGTGAAGACAAGTTTAATGATTTGAATAAGAGGTACAAGAGAGTGAACGATATTCTGGGTAAAGGAACAGCTTGTCTGGTGGTGGAAAATCACAGCTTGTTGGAGACGATGGACTTGTCACCAAAAAGGAAAGAGGAAGTTCGGAAATTGCTGAATTCTAAGCACCTTTTCTTCAGGGAAATGTGTGCTTACCACAATAGTTGTGGCCATGGCGGCGCCACCTGTGGGCCGCCGCAACAACAACAATCTCCGGAGGGGGGAACAGAGCCATCTCAAGCGCCTCCTCAACCACAACAACAGCACCAACGGTGTTCGCACTCGTCGGAAGTTGGGATGGCGAATTTGGGAAAGCCAGAATCAGAAGGACTCAAGATTTCTAAAGAGGTAAGCAGGGAAGAGGACGAAGAAGACGACGAAGATGATGTGTCAGAGGATTCTTCTGATGAGGACGAAGAAGAGTCAGGAGAAGGCGTTTCAAGGGGTCATAAAACTGGGAACGCACTTGAGTTAGACGACGTTGAGAATTATGAAGGAAGGCCGTCGACGAAGAGATCAAGAAAAGAAGAAATCTGTTCGTCGTCGTCAAAGCTAATGCAGGAAACGAGCAATGAAGTGATGGGTGTGTTACAAGACGGAGGAAGAAGTGCGTGGGAGAAAAGGCAATGGATGAAGAGGAAGGTAGTGCAGTTGGAGGAACAACAACTGAGGTACGAGGTAGAAGCGTTCGAGCTGGAGAAGCAGAGACTGAAATGGGCGAGATTTAGCAGCAAGAAAGAGAGGGACATGGAAAGAGCCAAGATTGAGAATCAAAGGAGGCAGCTGGAGAATGAGAGGATGGTTTTGCTGTTACGCCGGAAGGATCTTGAGCTGATGAGTCAATCTTCACCATCACCAGCGACGACAGCAGCGGCAGCCGCGGCGGCAACATTCTTCTAA 1455 0.477 MEPNGLGGGMFSSVSSGLLGVENPLQQQQQQQNLSNPQNPHPMHHSQMVSYASSHHETDIPQAPTQQSIKHGYPYSAKINQQMALSDDDEGGFGAEDNVSSGEKRKVSQWHRMKWTDTMVRLLIMAVYYIGDNEGGSEGADKKKPAGLLQKKGKWKSVSRAMMEKGFFVSPQQCEDKFNDLNKRYKRVNDILGKGTACLVVENHSLLETMDLSPKRKEEVRKLLNSKHLFFREMCAYHNSCGHGGATCGPPQQQQSPEGGTEPSQAPPQPQQQHQRCSHSSEVGMANLGKPESEGLKISKEVSREEDEEDDEDDVSEDSSDEDEEESGEGVSRGHKTGNALELDDVENYEGRPSTKRSRKEEICSSSSKLMQETSNEVMGVLQDGGRSAWEKRQWMKRKVVQLEEQQLRYEVEAFELEKQRLKWARFSSKKERDMERAKIENQRRQLENERMVLLLRRKDLELMSQSSPSPATTAAAAAAATFF 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1169 484 MobiDBLite consensus disorder prediction 26 68 - -
Lele07g1169 484 MobiDBLite consensus disorder prediction 305 327 - -
Lele07g1169 484 Gene3D - 115 187 - -
Lele07g1169 484 Coils Coil 400 420 - -
Lele07g1169 484 MobiDBLite consensus disorder prediction 247 282 - -
Lele07g1169 484 Coils Coil 430 464 - -
Lele07g1169 484 MobiDBLite consensus disorder prediction 328 366 - -
Lele07g1169 484 MobiDBLite consensus disorder prediction 247 371 - -
Lele07g1169 484 Pfam Myb/SANT-like DNA-binding domain 112 236 IPR044822 -
Lele07g1169 484 PANTHER F16F4.11 PROTEIN-RELATED 1 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1169 Lele-ChrLele07 7063199 7064653 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele07g1169 Myb_DNA-bind_4 1.5e-20 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1169 07 7063199 7064653 Lele13g1700 13 25593394 25598942 CCT
Lele07g1169 07 7063199 7064653 Lele14g1642 14 23989706 23995384 CCT
Lele07g1169 07 7063199 7064653 Lele15g0713 15 4116922 4122457 CCT
Lele07g1169 07 7063199 7064653 Lele16g0720 16 4054315 4059996 CCT
Lele07g1169 07 7063199 7064653 Lele07g1169 07 7063199 7064653 ECH
Lele05g1126 05 7032381 7033835 Lele07g1169 07 7063199 7064653 hybridization
Lele06g0989 06 6143269 6144570 Lele07g1169 07 7063199 7064653 hybridization