Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1166 ATGGCCTCTTGCGACGACGACTTCTCCCTCCTCAGTGACGATCATCACCAATCAAGCGCTGGCCCCCACCACCACCTTCACCAAACCTACGCACCGCATTCCTTCTCATCAGCCGTCACGCCTGTGCCCTCGGAACCGGTGGGCGACAACAGCGAAGTTTATGGATTTGATAACGAAGCTGACGAGAGCGAAAAGCGAAACGATCGGGAGGAGGCCGGCGACGGGACGACGGCGTACGGGTACAAAAGGCCCAAGCTTTCAAACGGCGGGGATTATAGGAAGGATAGGGAGGAGTGGAGCGACGCGGCGATTGTTTCCCTTCTTGAGGCTTATACAGAGAAGTTCACCCAGCTGAATCGAGGAAATCTTAGAGGCAGGGATTGGGAGGAAGTGGCGGCAATAGTTAGTGAGCGATGCGAAGATCAAACCAAGAGTGTGGAGCAATGCAAGAATAAAGTTGATAATTTGAAGAAGAGGTATAAGTTGGAAAGGCACAGGATGAGCAATGGCGGCATTTCAGCCAGTCATTGGCCTTGGTTCAAGCAGATGGAACAGATCATCGGCAATTCGCTTTCTACAAAGTACGTGCAGGATGAAGACAAGGGGATCGGTTCTGGGGGGAATTCGCCCAGACAACCAAAGAGATCTGGAGTCACAGTGCCCACCAGTGGAAGTCAACTGAATAGCTTGAAGTCAAAACCAATGTCAAATGTTAGATGGCGAAGGGTGGTCTTCAAAATTAGTGGAGCAGCTCTTACTGGATCTGCTACCTTCAATATTGACCTAAAGGTGGCCATGTTAATTTCAAAAGAAGTTGCCATAGCCTCTCGCAATGGTGTGGAGGTGGCAATTGTTGTTGGAGGTCGTAACTTTTTCTGTGGAGATGCATGGGTAACTGCAACTGGTTTAGAAAGATGTACTGCATACCAAGTTGGCATGATGGCTACTGTGATGAATTCTATATTGCTCCAATCAACTCTAGAGAAGATGGGTGTTCAAACTCGTGTACAAACTACCATTGCCATGCATGAATTTGCTGAACCATACAATAGGCAGCGGGCCATTAGACATCTTGAGAAAGGCAGAGTTGTTATATTCGGTGGCATTGGTTTTGGCGCTGGAAATCCACACTTTTCAACTGATATAGCTGCCGCTCTTCGAGCTTCTGAGATTAATGCTGAGGCTGTTCTCAAGGGTACTAATGTAGATGGTGTATATGACTGCAACTCCCGGGATGGCAATTTCACTTATGAGCACATATCCTTCAGGGAGCTGGTTTCAAGAGGTGCCACCTCTATGGATATGACGGCGCTGACATTCTGTGAGGAAAATGCTATTCCTGTTGTGGTTTTCAATCTCCTGGAGCCTGGGAACATTTCAAAAGCTTTGTGTGGAGAACAAGTGGGTACTCTAATTGACCAAAACGGACCCATAAGCTGA 1440 0.4806 MASCDDDFSLLSDDHHQSSAGPHHHLHQTYAPHSFSSAVTPVPSEPVGDNSEVYGFDNEADESEKRNDREEAGDGTTAYGYKRPKLSNGGDYRKDREEWSDAAIVSLLEAYTEKFTQLNRGNLRGRDWEEVAAIVSERCEDQTKSVEQCKNKVDNLKKRYKLERHRMSNGGISASHWPWFKQMEQIIGNSLSTKYVQDEDKGIGSGGNSPRQPKRSGVTVPTSGSQLNSLKSKPMSNVRWRRVVFKISGAALTGSATFNIDLKVAMLISKEVAIASRNGVEVAIVVGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTTIAMHEFAEPYNRQRAIRHLEKGRVVIFGGIGFGAGNPHFSTDIAAALRASEINAEAVLKGTNVDGVYDCNSRDGNFTYEHISFRELVSRGATSMDMTALTFCEENAIPVVVFNLLEPGNISKALCGEQVGTLIDQNGPIS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1166 479 SUPERFAMILY Carbamate kinase-like 239 472 IPR036393 -
Lele07g1166 479 MobiDBLite consensus disorder prediction 198 232 - -
Lele07g1166 479 MobiDBLite consensus disorder prediction 1 87 - -
Lele07g1166 479 Gene3D - 99 162 - -
Lele07g1166 479 FunFam Uridylate kinase isoform A 232 478 - -
Lele07g1166 479 Pfam Myb/SANT-like DNA-binding domain 96 186 IPR044822 -
Lele07g1166 479 CDD AAK_UMPK-PyrH-Ec 241 473 IPR015963 GO:0005737|GO:0006221|GO:0033862
Lele07g1166 479 Hamap Uridylate kinase [pyrH]. 238 473 IPR015963 GO:0005737|GO:0006221|GO:0033862
Lele07g1166 479 Gene3D - 231 477 IPR036393 -
Lele07g1166 479 Pfam Amino acid kinase family 242 452 IPR001048 -
Lele07g1166 479 MobiDBLite consensus disorder prediction 30 44 - -
Lele07g1166 479 FunFam Aspartate/glutamate/uridylate kinase family protein 99 162 - -
Lele07g1166 479 MobiDBLite consensus disorder prediction 58 76 - -
Lele07g1166 479 MobiDBLite consensus disorder prediction 209 232 - -
Lele07g1166 479 Coils Coil 139 166 - -
Lele07g1166 479 PANTHER URIDYLATE KINASE 93 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1166 Lele-ChrLele07 7048986 7052830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1166 70 190 Trihelix Transcription Factor Family AT3G14180 41.129 1.04e-18 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele07g1166 AA_kinase 9.2e-24 No_clan