Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1148 ATGAATCCGAATGACGAAGGTCAACCAAATTTTCCGAAGAGGTCGAAGGGTAAAACTTCGGCTGATACGTATTCTTCGAGTCATTTGGAGCAGGAAACATATGTGTTCTCTCCCACGGAATTGAGTTCTGGAGCATTCGGAGATGCCTCAGCTAGTCTCTCAATGGCGGACATTGGCCTTTCTGGCCATCCTCCTTCGTCTTTGTATGATTCTTCTTTAATGGAGTTTAGAGCATTCTCAACCATGAGCCCGACATCTCTGGCTTCCCCTCCTCCTCCTGCTCCTGTTAATGATGAAAGAGCTCCTTTGGTATCAGCAACTATTAAGGAGGAGGCCGGATTAATAGAAACAAGCGGTGAGTTGGAGGACGTGGATATGCCACGGCCGCTTGATTGTTTGCAGGAGAATCCGATTCCGCCATTTCTATGGAAAACTTGCGATCTGGTGGATGATCCATCTCTGGATCCGATCATATCATGGGGCTCGGCCGGTGCTAGTTTCGTGGTATGGGACCCTGTGGAATTTGCAAGGATCGTCTTGCCAAGGAATTTCAAGCACAACAATTTCTCCAGTTTTATCCGCCAGCTAAATACTTATGGGTTCCGCAAGATTGACCCTGATAAGTGGGAGTTTGCGAATGAAGGTTTCAGGCGAGGGAAGAGACATCTATTGAAGAACATACAAAGGCGCAGATCACTGCAATCCCAGCATGCTGGTATTGTTGGGCCATCCACTGAAGCAGGAAAGTCTGGAGTTGAGGTTGAGATAGAAAAACTGAGAAAGGAGAGAAGTATATTAGTCCAAGATTTGGTTGATTTGCAGCAACAACAGAGAAGAACTGTTCACCAGGCGGGACAAGTGAACCAGAAGCTTGAGTCTGCAGAGCAGAGACAGAAACAAATGGTTTCTTTCTTGGCGAAGTTATTTCAAAATCCAGCATTTTTAGCCCGACTGAGGCAACAGAAGGAACCGACAGGTATAGGTTCTCCAAGAGTGAGAAGGAAGTTTGTCAAGCAGCACCAACACGAGACAGGAACATCAGACTCTTTGAATGAAGGGCAGATTGTAAAATACCAACCTGGTTGGAGAGACATTACCAACCCTTCAGAAACACCAGCACTAAATCCAATTTCTATTGAACAGTCTCCTGAGTACCCTTCACAGGATTGGGCAAGAGAACTTGGCTCAGAAGCAGAAAATCCGTATGTGCATGCTGATGAATTGGCTTCAGCTAGTGAAATAATGACTGCTCCAGAGATCGTAGGAGAAGAATCGTCAAGCTTACGACTTGAAGATCCTCTTTGGAAAGGAAAAAACGTCACGAGACCAGATCAAGAAGTTATCCCAGAGGATCTGACCGGGGAGGACAGTGTTTCAATGTTTTACCCGCCTGAAACTGAAAGCGTTATTAAACAAGATTTATGGAACCCGGGCTTTAGTGTTAGCGGTGCTACTTCTAGCTATGTGAATGAGCTGTGGGACAATCCAATTCCAATCAATTATGAAGCGCCAGAATTTGGAGTGACAGGTGGCATGTCAGACCTCTGGGATATAAGCTATATGCAAGAAACCGGAAATTCAGGTCTCGATGACGATAATTGGCCAACGGATGAGTTCCCTCCAAATGAAACAGAAGGTCAGGCTGATCGCCCAAAAGATGGTTAG 1665 0.4577 MNPNDEGQPNFPKRSKGKTSADTYSSSHLEQETYVFSPTELSSGAFGDASASLSMADIGLSGHPPSSLYDSSLMEFRAFSTMSPTSLASPPPPAPVNDERAPLVSATIKEEAGLIETSGELEDVDMPRPLDCLQENPIPPFLWKTCDLVDDPSLDPIISWGSAGASFVVWDPVEFARIVLPRNFKHNNFSSFIRQLNTYGFRKIDPDKWEFANEGFRRGKRHLLKNIQRRRSLQSQHAGIVGPSTEAGKSGVEVEIEKLRKERSILVQDLVDLQQQQRRTVHQAGQVNQKLESAEQRQKQMVSFLAKLFQNPAFLARLRQQKEPTGIGSPRVRRKFVKQHQHETGTSDSLNEGQIVKYQPGWRDITNPSETPALNPISIEQSPEYPSQDWARELGSEAENPYVHADELASASEIMTAPEIVGEESSSLRLEDPLWKGKNVTRPDQEVIPEDLTGEDSVSMFYPPETESVIKQDLWNPGFSVSGATSSYVNELWDNPIPINYEAPEFGVTGGMSDLWDISYMQETGNSGLDDDNWPTDEFPPNETEGQADRPKDG 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1148 554 PRINTS Heat shock factor (HSF) domain signature 141 164 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele07g1148 554 PRINTS Heat shock factor (HSF) domain signature 179 191 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele07g1148 554 PRINTS Heat shock factor (HSF) domain signature 192 204 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele07g1148 554 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 127 366 IPR027725 -
Lele07g1148 554 MobiDBLite consensus disorder prediction 522 554 - -
Lele07g1148 554 MobiDBLite consensus disorder prediction 1 28 - -
Lele07g1148 554 SMART hsfneu3 137 230 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele07g1148 554 FunFam Heat shock transcription factor 1 134 231 - -
Lele07g1148 554 Gene3D - 133 231 IPR036388 -
Lele07g1148 554 Pfam HSF-type DNA-binding 141 230 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele07g1148 554 ProSitePatterns HSF-type DNA-binding domain signature. 180 204 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele07g1148 554 Coils Coil 256 276 - -
Lele07g1148 554 SUPERFAMILY "Winged helix" DNA-binding domain 137 230 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1148 Lele-ChrLele07 6935709 6938277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1148 126 538 HSF AT5G03720 45.708 9.44e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele07g1148 HSF_DNA-bind 1e-29 CL0123