Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1141 ATGGAAATGGACGATCACCACAACAACCATCATCATCCCCAGCAATATGCCATGCCGGATCTCAGGCATCTTATCAATGGCGCTCCCAGGTCCACTGCTATTCATTTCCCCTCCATACCTCCCCACCCCACGCCGGAGCTCTTCCACGCTCACCGGAATCTCACGCCCGCCTCCCATCAACACTACGACATGATGATGTTTGGTCGTCATGTCGCCGATGCAATGCCTCGTGCCCTCCACGACTTTGCCTCCGATTCACCTCCCGCCGCCGCGCCGCCCACTAACAATATTACTGTGGCCACTCCGGCTACCACCGCCTGCGCTTTCACTCCTCCGCTCAGTGGCTTAGAGGCCGAGACCCCAGGCAGCCTCGCCGGGGATGCCTCCACCGGAAGATGGCCCAGGCAGGAAACACTCACTCTTCTTGAGATCAGATCTCGTCTCGACCCTAAATTTAAAGAGGCCAATCAGAAGGGCCCCTTATGGGACGAAGTGTCTAGGATCATGTCAGAAGAATATGGATACCAAAGGAGTGGGAAGAAATGCAGGGAGAAATTCGAGAACTTGTACAAATATTACAAGAAGACAAAGGAAGGTAAGGCGAGGAGACAGGATGGGAAGCATTACAGGTTCTTCCGTCAACTTGAAGCTTTGTATGGAGGAAACGGCAACTCAACCTCAGTACCAGAAACCAATTATGGTAGCAGCGGAATTGGATTTCAGACCCCCTCCCAAACAAATCAAGACATGTTTCAGTCTCACAACCACAAGACTTGTGATAGCCTCAGCCTGACGAACTCAACAGATTTCGGCACGTCGTCATCGGAGGACAACAATCTTTGCAGCATGGAAAATGATTCCACGGAGAAGGGGAGGAAGAGGAGTAGTGGAATCAGATGGAAGGCAAAAATAAAAGAGTTCATTGACTCACAGATGAAGAAGCTGATTGACAAGCAAGAGGCGTGGATGGATAGGCTCGTGAAGACGCTAGAACAGAAGGAGAAGGAGAGAGTTTTAAGAGAGGAAGAATGGAGAAGACAAGAGGCTGCGAGGTTGGAAATGGAGCACAAGTTTCGGGCTAAAGAGAGAGCGTGGATTGAAGCAAGGGATGCTGCTCTAATGGACGCCTTGCAGAAACTAACGGGGAGAGAGGTAAAAGCTCAATCTCCTGTTGAGCAGGCTCTAATTATGGCTAATGAAATTCATAATCATAGGGAAAACCAGAACGAAGAGGGAGGTGAAATTCTCGATGGTAGTCATAGAGGTGCTGACAACTGGTCAAAAAGTGAGATTACAAAGCTCTTAGAGTTGAGGGCCAAGATGGAGTCCGGGTTTCAGCAAGGTGGGTGCTCGGAAGAGGTTATGTGGGAGGAAGTAGTAAACAAAATGGATTGCTTTGGCTACGAAAGGACTGCTTTGATGTGCAAACACAAGTGGGAAAGCATAACCAGCTATGCAAATGCTAAGGAAGGAATCAAGAAGCGCAAGGAAAAGTCTAGAAGCTGTTTTTACTTCGACAACAACATCAATGAGCAGCCATCCTTGTATAACCAACAAAGAACCACTCCGTATTGCGATATCAACGTTAATGATCAACGGCACGACAATGAGAGGCTACAAACAAATGATGGCTCTTCGCCTTCAAATTCAAATGCGGTTGCTGCTGACGTTAACTGCTTTCCCTTCTTAATTAGCACGGAAGGATCAGAAAATTTGTGGGAAAGCTACGGCTTGAAGATTAATAAAGGAAATCAAAACCAGTGA 1764 0.4813 MEMDDHHNNHHHPQQYAMPDLRHLINGAPRSTAIHFPSIPPHPTPELFHAHRNLTPASHQHYDMMMFGRHVADAMPRALHDFASDSPPAAAPPTNNITVATPATTACAFTPPLSGLEAETPGSLAGDASTGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMSEEYGYQRSGKKCREKFENLYKYYKKTKEGKARRQDGKHYRFFRQLEALYGGNGNSTSVPETNYGSSGIGFQTPSQTNQDMFQSHNHKTCDSLSLTNSTDFGTSSSEDNNLCSMENDSTEKGRKRSSGIRWKAKIKEFIDSQMKKLIDKQEAWMDRLVKTLEQKEKERVLREEEWRRQEAARLEMEHKFRAKERAWIEARDAALMDALQKLTGREVKAQSPVEQALIMANEIHNHRENQNEEGGEILDGSHRGADNWSKSEITKLLELRAKMESGFQQGGCSEEVMWEEVVNKMDCFGYERTALMCKHKWESITSYANAKEGIKKRKEKSRSCFYFDNNINEQPSLYNQQRTTPYCDINVNDQRHDNERLQTNDGSSPSNSNAVAADVNCFPFLISTEGSENLWESYGLKINKGNQNQ 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1141 587 CDD GT1 132 197 - -
Lele07g1141 587 SMART sant 422 485 IPR001005 -
Lele07g1141 587 SMART sant 129 192 IPR001005 -
Lele07g1141 587 Pfam Myb/SANT-like DNA-binding domain 424 506 IPR044822 -
Lele07g1141 587 Pfam Myb/SANT-like DNA-binding domain 132 218 IPR044822 -
Lele07g1141 587 Coils Coil 316 343 - -
Lele07g1141 587 PANTHER FI21293P1 120 535 - -
Lele07g1141 587 MobiDBLite consensus disorder prediction 270 285 - -
Lele07g1141 587 MobiDBLite consensus disorder prediction 270 295 - -
Lele07g1141 587 FunFam Trihelix transcription factor GT-2 426 488 - -
Lele07g1141 587 FunFam trihelix transcription factor PTL-like 133 195 - -
Lele07g1141 587 Gene3D - 133 195 - -
Lele07g1141 587 Gene3D - 426 486 - -
Lele07g1141 587 ProSiteProfiles Myb-like domain profile. 125 190 IPR001005 -
Lele07g1141 587 ProSiteProfiles Myb-like domain profile. 418 483 IPR001005 -
Lele07g1141 587 CDD GT1 425 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1141 Lele-ChrLele07 6895575 6898253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1141 11 582 Trihelix Transcription Factor Family AT5G03680 45.411 1.52e-140 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele07g1141 Myb_DNA-bind_4 9.8e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1141 07 6895575 6898253 Lele13g1689 13 25515797 25516342 CCT
Lele07g1141 07 6895575 6898253 Lele14g1629 14 23902249 23902794 CCT
Lele07g1141 07 6895575 6898253 Lele15g0728 15 4208018 4208563 CCT
Lele07g1141 07 6895575 6898253 Lele16g0733 16 4148732 4149277 CCT
Lele07g1141 07 6895575 6898253 Lele07g1141 07 6895575 6898253 ECH
Lele05g1100 05 6859519 6862203 Lele07g1141 07 6895575 6898253 hybridization
Lele06g0966 06 5977716 5980387 Lele07g1141 07 6895575 6898253 hybridization