Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1139 ATGACGAATAAGAAGCCAAGAGCCGGAAGTAAGAAGTTCCAAGAGACTCGTCACCCAACATACAAAGGCGCGAGGCAGAGAAACGGCAAGTGGGTTTGCGAGCTTCGACAGCCCAACAACAACAAAGCACGCCTGTGGCTCGGAACCTTTGCTAGCCCTGACATGGCCGCCATAGCCCACAATGTTGCTGCTCTTGCTTTCAAGGGCGATTCTGAGTCCTTGAATTTCCCCGACGCTGCTTCCTCCTTGCCTCGCCTTAATCCACGGACCTCCTCCCTCAGATCCATCCAGTTCGCAGCCATGGAAGCGGCTGAGAAGCTTCTCTGCGACGACGATGAGTCTGGGAAGAACATGTCAGCTTTGTCTCTGGACTGCAACTTCGAGTGCTCGGAAGCATTAGAAGAAGAAGGGGACGCGTCGGCGAGGAGTATGTATTGGGATGAAGAAGAGGTGTTCAACATGCCTGGACTCATGAACAGCATGGCAGAAGGGCTGATTATCACACCACCAGCCTTGCAGAGAGGCTTCAATTGGGATGACATCGAAACCACCACCACCGACTTGACACTCTGGGGAGACTGA 582 0.5344 MTNKKPRAGSKKFQETRHPTYKGARQRNGKWVCELRQPNNNKARLWLGTFASPDMAAIAHNVAALAFKGDSESLNFPDAASSLPRLNPRTSSLRSIQFAAMEAAEKLLCDDDESGKNMSALSLDCNFECSEALEEEGDASARSMYWDEEEVFNMPGLMNSMAEGLIITPPALQRGFNWDDIETTTTDLTLWGD 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1139 193 Pfam AP2 domain 20 68 IPR001471 GO:0003700|GO:0006355
Lele07g1139 193 SUPERFAMILY DNA-binding domain 20 78 IPR016177 GO:0003677
Lele07g1139 193 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 4 191 IPR045277 GO:0003700
Lele07g1139 193 MobiDBLite consensus disorder prediction 8 22 - -
Lele07g1139 193 Gene3D AP2/ERF domain 20 78 IPR036955 GO:0003700|GO:0006355
Lele07g1139 193 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Lele07g1139 193 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Lele07g1139 193 MobiDBLite consensus disorder prediction 1 25 - -
Lele07g1139 193 CDD AP2 21 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1139 Lele-ChrLele07 6870791 6871372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1139 4 191 AP2-EREBP Transcription Factor Family AT4G25470 46.561 1.55e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele07g1139 AP2 5.8e-07 CL0081