Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1136 ATGGACTTCCCTCTGAAGCAATGGAAAAACCAGCACGAGTCTGAATCGGAGGAACAGCATTTTGCAAAGATGCCGAGGCTCATGCTTGAATATCATCTACACCCACCACCACATTCGTCCCCCTCTTCCCCTGCTCTCCCTCTCTTTGTGCCTGAACTCCACACCAAAGACAACTCCCTCTCCCCATTTCCTGATTCCTCATCACCCACCGCTAGATTTCCTAGAATGGGGAGTTATTTTAGTGTGGCTCAGTGGCAGGAGCTGGAGTTGCAGGCACTGATATTCAGGTACATGTTGGCGGGTGCTGCTGTGCCCCCTGAGCTTCTTCTGCCAATCAAGAAGAGCCTTCTTCATTCTGCTCCTTACTTCCTCCGTTATCAGCCTTCTCTGTTGCAATCGGGATACTGGGGAGGAGCTAACATGGATCCAGAGCCTGGCCGCTGCCGAAGGACGGACGGCAAGAAATGGCGGTGCTCGAGAGACGTGGTGGCCGGCCAGAAGTACTGTGAGCGCCACATGCATCGCGGTCGAAACCGTTCAAGAAAGCCTGTGGAAGTACCCACGCCATCCACTGCGGGAGGCCTTGGCTCTGGCAAAGCCGGCTTCGGCGTCGGGTGTCCCTCTTCTACAACAGCCTCTGCATCTGCCCCGCATATGACACCAACATCGTTTAGATCCCCTTTCGATCTGCTTCAGCTCAAACGATGTTCATCTGGGACCATCGAGAATGAAAAGGAGAGCGTATTTGAAAACCAAGGTCGAGATCACGTGGACGGTGGAGGGAGATCAGATGGGCATATTCTGCGACATTTTTTCGATGATTGGCCACGATCACTTCAGGAACCTGACAATGCCGAAAGTAACGCTAGCTCCATCAACTCAGCCACATGCCTCTCTATTTCAATGCCCGGAAATGCTTCGTCGGACGTGTCCCTGAAATTGTCCACGGGCGATGATGCACAGTATCCATGTCCCAGAAATGGGAATGTGGGCCAACAGCATTTTCAGTTGAATTGGGCAGGAGGATGGGCTTCTTCGGCTAATCATGGGGCTTCCATGGGAGGACCACTCGCAGAGGCTCTCAGATCATCCACCACAACGTCTTCACCCACAAGTGTCTTGCACCAGTTGCCTCGCAGTTCTGCTTCTGAAACCAGCTTAATTAGCACCTAG 1173 0.5286 MDFPLKQWKNQHESESEEQHFAKMPRLMLEYHLHPPPHSSPSSPALPLFVPELHTKDNSLSPFPDSSSPTARFPRMGSYFSVAQWQELELQALIFRYMLAGAAVPPELLLPIKKSLLHSAPYFLRYQPSLLQSGYWGGANMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVEVPTPSTAGGLGSGKAGFGVGCPSSTTASASAPHMTPTSFRSPFDLLQLKRCSSGTIENEKESVFENQGRDHVDGGGRSDGHILRHFFDDWPRSLQEPDNAESNASSINSATCLSISMPGNASSDVSLKLSTGDDAQYPCPRNGNVGQQHFQLNWAGGWASSANHGASMGGPLAEALRSSTTTSSPTSVLHQLPRSSASETSLIST 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1136 390 PANTHER GROWTH-REGULATING FACTOR 5 50 309 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele07g1136 390 ProSiteProfiles WRC domain profile. 142 186 IPR014977 -
Lele07g1136 390 MobiDBLite consensus disorder prediction 354 390 - -
Lele07g1136 390 Pfam QLQ 80 112 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele07g1136 390 ProSiteProfiles QLQ domain profile. 79 114 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele07g1136 390 MobiDBLite consensus disorder prediction 176 200 - -
Lele07g1136 390 Pfam WRC 143 185 IPR014977 -
Lele07g1136 390 SMART QLQ_2 78 114 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele07g1136 390 MobiDBLite consensus disorder prediction 1 20 - -
Lele07g1136 390 MobiDBLite consensus disorder prediction 359 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1136 Lele-ChrLele07 6846562 6848498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1136 1 377 GRF Transcription Factor Family AT3G52910 48.849 4.38e-93 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele07g1136 WRC 2.4e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1136 07 6846562 6848498 Lele07g1136 07 6846562 6848498 ECH
Lele05g1095 05 6808068 6809993 Lele07g1136 07 6846562 6848498 hybridization
Lele06g0961 06 5920027 5921971 Lele07g1136 07 6846562 6848498 hybridization