Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1126 ATGCAGATCTTTGTCAAAACCTTGACGGGAAAGACCATCACTCTTGAGGTGGAAAGTTCCGATACGATCGATAATGTCAAAGCGAAGATCCAGGATAAGGAGAGGAGAGTGGGAGTAAAAGTGGCAATAACACTCAACAATGGCTTCAAGATGCCGATCATCGGTCTCGGGGTTTGGCGCATGCAAGGTCAAGAAGTCATGGATCTTATAATCAACTCTATCAAGCTCGGTTATCGCCACTTTGATTGTGCTGCTGATTACAAGGATGAAGCTGAAGTTGGAGACGCTCTTGCAGAGGCTTTTAAAACTGGGCTAGTGAGGAAGGATCTTTTCATCACTAGCAAGCTTTGGAATTCTGACCACGGATACGTTATTGAGGCCCATGCTTCCAGCTCGATTCTCTTGTCAAATTTTGTCAAAAGCATGGAATTTGTGTCACGGCCCACACTCCACTGGGAGGTGCTTCAGCAAACACAGAATGGTTTGGTACAGTTTCATGTTTGGACGATCAAGTTCTGA 519 0.4528 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKERRVGVKVAITLNNGFKMPIIGLGVWRMQGQEVMDLIINSIKLGYRHFDCAADYKDEAEVGDALAEAFKTGLVRKDLFITSKLWNSDHGYVIEAHASSSILLSNFVKSMEFVSRPTLHWEVLQQTQNGLVQFHVWTIKF 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1126 172 PANTHER ALDO/KETO REDUCTASE 42 129 - -
Lele07g1126 172 SUPERFAMILY NAD(P)-linked oxidoreductase 42 123 IPR036812 -
Lele07g1126 172 Pfam Ubiquitin family 3 35 IPR000626 GO:0005515
Lele07g1126 172 Gene3D - 41 140 IPR036812 -
Lele07g1126 172 Gene3D - 1 40 - -
Lele07g1126 172 FunFam Polyubiquitin-C 1 34 - -
Lele07g1126 172 SUPERFAMILY Ubiquitin-like 1 35 IPR029071 -
Lele07g1126 172 Pfam Aldo/keto reductase family 54 121 IPR023210 -
Lele07g1126 172 ProSiteProfiles Ubiquitin domain profile. 1 39 IPR000626 GO:0005515
Lele07g1126 172 ProSitePatterns Aldo/keto reductase family signature 1. 77 94 IPR018170 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1126 Lele-ChrLele07 6791308 6791826 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1126 1 34 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 100.000 3.04e-16 69.3