Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1121 ATGGCGAGTGGGCTCACGGGCGCTAATTCCAACGGGGTTTCCGGCTCTCGCGCCAATCCTGAGAAGCTCATTATCGATACTGACCCTGGGATTGATGATAGCATGGCAATCATGATGGCGTTTCAAACACCTGGGGTGGAGGTCCTGGGCTTGACAACCATATTTGGTAATGTTTCTACAGAAGATGCCACTCGCAATTCATTGCTTTTGTGTGAGATTGCTGGCTGTCAAAACGTTCCAGTGGCAGAGGGCACCCCTGGGCCCTTGAAGGGTGGAATTCCACGAGTTGCTGACTTTGTGCATGGTTCTGATGGGCTTGGAAACATATCCCTACCCCGACCAAAAGCTAAGAAGATAGATAAAAGTGCTTCGGAGTTTTTGGTGGAGAAGGTTTCTGAATACCCTGGTGAAATATCTGTGTTAGCACTTGGACCGCTGACAAATTTAGCTTTGGCCATCAGAAGAGATTCTTCTTTTGCTAGCAAGGTGAAGAGAGTGGTTATACTCGGTGGTTCTTTCTTTGCCTTGGGGAATGTAAATCCAGCAGCAGAAGCAAATATATACGGAGACCCAGAAGCAGCGGATATTGTGTTTACTTCTGGCGCAAATATTGTTATTGTCGGAATAAATATCACAACCCAAGTGCAATTTACAGGTACTGAATACTGTCTTTTGATTTCAGATGCTGACCTCCTTCAATTGAAAAATTCCGGTGGAAAGCATACACAACTCTTAAGTGAGATGTGCAAATTTTACCGGGATTGGCACGTTAAATCTGATGGTGTCTACGGAATTTTCCTTCACGACCCTGTCAGTTTCGTAGCACTTGTTCGTCCAGATCTTTTTACATACAAGAGAGGGGTAGTGAGGGTAGAGACACAAGGCCTCTGTGTCGGGCATACACTATTGGACCAAGGGTTAAAGAAATGGAATTCAAGCAATCCATGGACGGGTTTTTCCCCTGTTTCAGTTGCTTGGACGGTGGACGTAGATGGGGTCATTAAGTACATCAAGGAGACATTAATGAAGCCCTGA 1035 0.457 MASGLTGANSNGVSGSRANPEKLIIDTDPGIDDSMAIMMAFQTPGVEVLGLTTIFGNVSTEDATRNSLLLCEIAGCQNVPVAEGTPGPLKGGIPRVADFVHGSDGLGNISLPRPKAKKIDKSASEFLVEKVSEYPGEISVLALGPLTNLALAIRRDSSFASKVKRVVILGGSFFALGNVNPAAEANIYGDPEAADIVFTSGANIVIVGINITTQVQFTGTEYCLLISDADLLQLKNSGGKHTQLLSEMCKFYRDWHVKSDGVYGIFLHDPVSFVALVRPDLFTYKRGVVRVETQGLCVGHTLLDQGLKKWNSSNPWTGFSPVSVAWTVDVDGVIKYIKETLMKP 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1121 344 MobiDBLite consensus disorder prediction 1 17 - -
Lele07g1121 344 SUPERFAMILY Nucleoside hydrolase 20 341 IPR036452 GO:0016799
Lele07g1121 344 FunFam Probable uridine nucleosidase 1 16 344 - -
Lele07g1121 344 Pfam Inosine-uridine preferring nucleoside hydrolase 23 334 IPR001910 GO:0016799
Lele07g1121 344 Gene3D - 9 344 IPR036452 GO:0016799
Lele07g1121 344 MobiDBLite consensus disorder prediction 1 22 - -
Lele07g1121 344 CDD nuc_hydro_CaPnhB 22 341 - -
Lele07g1121 344 PANTHER INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE 21 343 IPR023186 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1121 Lele-ChrLele07 6764995 6768392 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1121 07 6764995 6768392 Lele13g1670 13 25410177 25410605 CCT
Lele07g1121 07 6764995 6768392 Lele14g1614 14 23806368 23807882 CCT
Lele07g1121 07 6764995 6768392 Lele15g0745 15 4305374 4305886 CCT
Lele07g1121 07 6764995 6768392 Lele16g0751 16 4250515 4250943 CCT
Lele05g1084 05 6725372 6728758 Lele07g1121 07 6764995 6768392 hybridization
Lele06g0948 06 5831933 5835405 Lele07g1121 07 6764995 6768392 hybridization