Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1120 ATGAAGGAGGGCTTGAGGGAGAGGAAGACGGAGGGGGTAGAGGCTGAAGAAGATGGAGACGACGAACAAAGCAATGGGCAAAGCAGGGTGGCGGTTGTCGAGAGTGTACTCTTTTCTCCTCCCAGTCATCATTCTCCTCCTGCATCCCATCTCTCAACCTCACTCTCATCTCAACAATCTTGCCAATTCATTTGTATCAATCAGGTCAGAGCTTCGTGGATTCTGAATCGCAGAATCTCAGGCAAAATTCATCTTTTGTTTCTTTCAAAGCACAAGAAGATAAATCCGCAATCTCATATCCTGACGCGCGCGGGACACAACATGGCAGAGGAGCAACGATGCCAGACATTCGAGGGCCACCGGCTTTGTGCCAACAACTGCGGCTTCTTCGGAAGTCCAACCACCATGAATCTCTGTTCCAAATGCTACAGAGATTGTTGTCTCAAGGAACAACAGCAAGCCGCTACGAAATCAACCATCGAAACCGCTCTCTCCTCGACATCCACCCGTACGCCTTCGCTGGCCATGGAGTCCCTCCCTCTTCCGCAGGCGTCGAAAGCATCGGATGTTGCGGCGGACGCGTCGATCTCGGAGCCGGCAGCCGCCGTACCAGATGGGACGGCGGGACAACCAAACCGGTGTGCGACGTGTCGTAAAAAGGTCGGGTTTACCGGGTTCAAGTGCAAGTGCGGGATCACGTTTTGTGGCGCCCACAGGTACCCGGAGAAACACGGGTGTAGCTTCGATTTCAAGTGGGCGGGGCGAGAGGAAATAAGTCGAGCGAATCCTGTGGTCATAGCGGAGAAGCTCCGTAAGATTTAA 822 0.5328 MKEGLRERKTEGVEAEEDGDDEQSNGQSRVAVVESVLFSPPSHHSPPASHLSTSLSSQQSCQFICINQVRASWILNRRISGKIHLLFLSKHKKINPQSHILTRAGHNMAEEQRCQTFEGHRLCANNCGFFGSPTTMNLCSKCYRDCCLKEQQQAATKSTIETALSSTSTRTPSLAMESLPLPQASKASDVAADASISEPAAAVPDGTAGQPNRCATCRKKVGFTGFKCKCGITFCGAHRYPEKHGCSFDFKWAGREEISRANPVVIAEKLRKI 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1120 273 SMART A20_3 120 144 IPR002653 GO:0003677|GO:0008270
Lele07g1120 273 Gene3D - 187 268 IPR035896 -
Lele07g1120 273 Pfam A20-like zinc finger 121 144 IPR002653 GO:0003677|GO:0008270
Lele07g1120 273 ProSiteProfiles Zinc finger A20-type profile. 117 151 IPR002653 GO:0003677|GO:0008270
Lele07g1120 273 MobiDBLite consensus disorder prediction 1 27 - -
Lele07g1120 273 SUPERFAMILY AN1-like Zinc finger 208 268 IPR035896 -
Lele07g1120 273 SMART AN1_Zf_4 214 251 IPR000058 GO:0008270
Lele07g1120 273 ProSiteProfiles Zinc finger AN1-type profile. 208 254 IPR000058 GO:0008270
Lele07g1120 273 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 122 168 - -
Lele07g1120 273 Gene3D - 106 170 - -
Lele07g1120 273 FunFam Zinc finger AN1-type containing 6 188 269 - -
Lele07g1120 273 Pfam AN1-like Zinc finger 214 250 IPR000058 GO:0008270
Lele07g1120 273 PANTHER AN1-TYPE ZINC FINGER PROTEIN 119 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1120 Lele-ChrLele07 6758420 6759852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1120 108 273 C2H2 Transcription Factor Family AT3G52800 54.118 1.54e-50 162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1120 07 6758420 6759852 Lele07g1120 07 6758420 6759852 ECH
Lele06g0945 06 5819763 5820263 Lele07g1120 07 6758420 6759852 hybridization