Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1101 ATGTCCTCGGTTCTCACAAACCCATCGCTTAATGCATCCCCATTCCGTTCTTCAACCCAAAGCCTAAAACTGAGACCCATATCCCCCCTTTTCTCCATTCAACGTTTCCCTAGACTCCCCCAACTTCGAGTTTCCCTTACAATCCATAACTCCACCAATCGTCCTTCCATTATTCCTTCAAAGGGCAAAGCTTCCAATACTCTCTCACTTCCTAAGACACTTCACTTCCTCAAACCCTGGCTTCTCTCTCAGCATAAAACCGTTCTCTTGGGCTGGCTCTGCAGCGTCATATCTGTTTACTCCCTCTCCAAAATCGTTTCTAAAGTCGGGAATGTTTCTGCTACTATCAGCAGCATTGACGCTATCAAGTTGCGAGACGAAGGTTTAGCATTGGGGGGTTTGGTGATTGCCCGGTTGGTTGCAAGTTATGGGCAACAAGCCTTTTTATGGGAAGCTGCACTGAATGCAGTATATAAGCTTAGGGTTCACGTTTTCGACAGGATTTTGCAGAGAGAATTGGGATATTTTGAAGGCAAGGATGGTGTTTCATCCGGGGACATTGCGTATCGGATCACTGCGGAAGCTTCGGATATTGCTGATACTATATATGCTCTGCTCAATACCATAATTCCCAGCACTCTGCAGCTATCTGCTTTGATGATGCGAATGTTGGTGATCAGTCCTGTCCTATCTTTGATTTCAGCTGTGGTTATTCCTTGTATGGCACTTGTTGTGGCCTTTCTTGGTCAGAAACTTCGTTCAATATCTAGAAAGGCTCAACTTAGCATTGCCACTCTCTCGGCATATCTAAATGAGGTCCTTCCTGCAATTCTTTTTGTGAAAGCAAACAATGCAGAACTGTGTGAGAGTAGCAGGTTTAAGAGGCTGGTTAGGATTGACTTTTATGAACGCCTGAACAAGAAGAGGATGAAGGCAGTTATTCCTCTGATTATACAAGCTATTTATTTTGGAGCGCTATCTATACTCTGTGCTGGTTCAATAGTGGTTTCAAGAGGATCATTCAATGGCTGTAACCTAGTTTCGTTTGTGACATCGTTGCTCTTTTTGATTGAACCAATCCAGGATGTGGGAAAGGCATACAATGAATTGAGGCAGGGAGAACCAGCTATTGAACGCTTGTTTGATCTGACCAGGTTCACAGATAAGGTGGTTGAGAAACCAGATGCTGTTGATTTAGACTCTGTTAGAGGGGAGATAAAGTTTTGTAATGTCTCATTTAAGTACAGTGAAGAAATGTCACTTGTTCTGAATGGACTGAACCTTCACATTGGAGCTGGAGAGATAGTTGCTCTTGTTGGTCCCTCTGGTGGAGGGAAAACAACACTCATAAAGCTGTTTCTTCGTCTTTATGATCCAGTATCTGGCTGTATACTTATTGATAATCATGACATCCAAAGCATTCGGTTGCAAAGCTTGAGAAGACATGTTAGTCTTGTTTCTCAGGATATAACACTTTTTTCAGGAACAGTTGCTGAAAACATTGGTTATAAGGATCTTACAGCAGAAATTGACATGGAGAGGGTAAAACACGCAGCACAAACTGCTAATGCTGATGAATTTATAAGAAAACTTCCTGAAGGATATAATACCAATATTGGACCAAGGGGCTCTACTTTAAGTGGAGGACAAAGGCAAAGGCTAGCAATTGCCAGGGCAATATATCAGAATTCTTCTGTGTTAATACTGGATGAGGCAACTTCTGCTTTAGATAGCAAATCTGAATTATTGGTGAGACAAGCTATAAAGCGATTGATGAAAAATCACACAGTGCTGATAATTGCCCATCGCATGGAAACGGTTCGGATGGCTAAACGAGTATTCCTCTTGGATAAGGGGAAGCTAGAAGAGTTGCCTCGTTCTGCTATATTGGGTGGTCACAAGGACTCGTTGTTATCATCTGGTTTGGTTATTTGA 1935 0.4248 MSSVLTNPSLNASPFRSSTQSLKLRPISPLFSIQRFPRLPQLRVSLTIHNSTNRPSIIPSKGKASNTLSLPKTLHFLKPWLLSQHKTVLLGWLCSVISVYSLSKIVSKVGNVSATISSIDAIKLRDEGLALGGLVIARLVASYGQQAFLWEAALNAVYKLRVHVFDRILQRELGYFEGKDGVSSGDIAYRITAEASDIADTIYALLNTIIPSTLQLSALMMRMLVISPVLSLISAVVIPCMALVVAFLGQKLRSISRKAQLSIATLSAYLNEVLPAILFVKANNAELCESSRFKRLVRIDFYERLNKKRMKAVIPLIIQAIYFGALSILCAGSIVVSRGSFNGCNLVSFVTSLLFLIEPIQDVGKAYNELRQGEPAIERLFDLTRFTDKVVEKPDAVDLDSVRGEIKFCNVSFKYSEEMSLVLNGLNLHIGAGEIVALVGPSGGGKTTLIKLFLRLYDPVSGCILIDNHDIQSIRLQSLRRHVSLVSQDITLFSGTVAENIGYKDLTAEIDMERVKHAAQTANADEFIRKLPEGYNTNIGPRGSTLSGGQRQRLAIARAIYQNSSVLILDEATSALDSKSELLVRQAIKRLMKNHTVLIIAHRMETVRMAKRVFLLDKGKLEELPRSAILGGHKDSLLSSGLVI 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1101 644 FunFam ABC transporter related 75 386 - -
Lele07g1101 644 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 406 643 IPR003439 GO:0005524
Lele07g1101 644 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 89 372 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g1101 644 FunFam ABC transporter ATP-binding protein 399 640 - -
Lele07g1101 644 Pfam ABC transporter transmembrane region 122 359 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g1101 644 SUPERFAMILY ABC transporter transmembrane region 78 385 IPR036640 GO:0005524|GO:0016020
Lele07g1101 644 CDD ABC_6TM_exporters 128 380 - -
Lele07g1101 644 Pfam ABC transporter 423 574 IPR003439 GO:0005524
Lele07g1101 644 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 116 623 IPR039421 -
Lele07g1101 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 395 624 IPR027417 -
Lele07g1101 644 Gene3D ABC transporter type 1, transmembrane domain 62 385 IPR036640 GO:0005524|GO:0016020
Lele07g1101 644 Gene3D - 396 640 IPR027417 -
Lele07g1101 644 SMART AAA_5 432 620 IPR003593 -
Lele07g1101 644 ProSitePatterns ABC transporters family signature. 546 560 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1101 Lele-ChrLele07 6646986 6651054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1101 148 641 Calmodulin-binding Proteins AT2G36910 31.881 4.31e-63 225