Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1085 ATGGCAATAGGAAAATCTTATCAGAGAGAGATGGAAAATATGGCACCTGGATATCGGTTCTACCCAACTGAAGAGGAACTCATTTCCTTCTATTTGCAGAGAAAGCTTGAAGGAGATCAGAGGGAGGACATCAACCGAGTTATGCCTGTGCTTGATATTTATGAATATAATCCTTGGGATCTCCCACAGGTGTCGGGAGAGGCGAGTCTGAGAGACACAGAGCAGTGGTTCTTTTTCATTCCCAGACAAGAAAGCGAAGCTCGTGGAGGAAGACCAAGACGACTCACAACAACAGGCTACTGGAAAGCGACTGGGTCTCCGAACCATGTCTATTCCTCTGATAATCGCATCATCGGCATGAGAAGAACCATGGTTTTCTACAACGGAAGAGCCCCCAACGGCCGCAAAACCGATTGGAAGATGAACGAGTACAAGGCCATCGGCGGTGAACCCTCCTCAACTCGCCCACCAGCTCCTCTGTTGAGGCAGGAATACAGTTTATGCAGGGTTTACAAGAAATCAAAGTGCCAGCGAGCATTTGACAGAAGGCCACCTCCAAGGAGAGAGACGGATGCTTATGGGGTTTCAAGCTCGACGTCTCATCAACAAGTTCAAAACGCAGGGTCAGCTTCATCAAAGGGACCGATAGGAACAGTAAGCTCACCAGAGAGTTCATCATCAGGAGACCATGGACAAGCTTCACAAAGTGGGGACGGGTCGGGTCAAATGGATTTGGACGATGAGCCCTTGTTGGATTGGGAGCAAGTTGACTGGTTTCTTGGCAAGCATGACCCGACCGTGTGA 804 0.4913 MAIGKSYQREMENMAPGYRFYPTEEELISFYLQRKLEGDQREDINRVMPVLDIYEYNPWDLPQVSGEASLRDTEQWFFFIPRQESEARGGRPRRLTTTGYWKATGSPNHVYSSDNRIIGMRRTMVFYNGRAPNGRKTDWKMNEYKAIGGEPSSTRPPAPLLRQEYSLCRVYKKSKCQRAFDRRPPPRRETDAYGVSSSTSHQQVQNAGSASSKGPIGTVSSPESSSSGDHGQASQSGDGSGQMDLDDEPLLDWEQVDWFLGKHDPTV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1085 267 SUPERFAMILY NAC domain 8 173 IPR036093 GO:0003677|GO:0006355
Lele07g1085 267 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 213 - -
Lele07g1085 267 ProSiteProfiles NAC domain profile. 14 173 IPR003441 GO:0003677|GO:0006355
Lele07g1085 267 Gene3D NAC domain 23 177 IPR036093 GO:0003677|GO:0006355
Lele07g1085 267 MobiDBLite consensus disorder prediction 192 241 - -
Lele07g1085 267 MobiDBLite consensus disorder prediction 176 248 - -
Lele07g1085 267 Pfam No apical meristem (NAM) protein 16 145 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1085 Lele-ChrLele07 6555303 6557300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1085 12 258 NAC Transcription Factor Family AT5G22380 47.581 1.69e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele07g1085 NAM 2.3e-31 No_clan