Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1070 ATGAAGCTACCGTTTCTTGTCAAGAATAAGTCAGAAATGAGGTCATCTTCTTCCTGGCCTTGGCCGTCTTGTCACCAACCCAGAACCCTCTCTTTCAGAGCCAACACCGCCGACTCGGATTCCAAAGCAGCGGAAGTCGACCCGGTAGAGACCTTGGTTCGCGGGTTGCGGTCGGACCGGAGGCGGCTGTTTTTCGAGCCTGACGAGACTAGCTCCATATTGGAGACGAAAGCTTCTGCAGAAGGAGGACGCGTGCCATTCAAAGACAGCTTCGTACTATCCATGGAGTCTCGAGACCCTTACGATGACTTTCGAAAGTCCATGGAGGAGATGGTGGAGGCTCACTCCCTCAAGCACTTGGAGGCTCTTCAGGAACTTCTGTTTTGGTATTTGAGGGTCAATGCCAAAAGCAATCATGACTGTATTCTCACTGCTTTTGTAGATTTATTGGTTGGTCTTTCTCCTTCTTCTCCTTCTCCCTGCCCTTCTTCTTCTCATTTATCTTTTTCTACTGCGTCTATGTCTTCTTCCTTTAGTACACGTTGTGTTAATGATTCTTCCTTAGAAGCCGAGGAAGAGGTCGATGCAACTGATCAGGCTTCAACTTCGGCTTCGTCGTCGCCGCAAAAAGTTAATGAGGTCCTTATTGACCCTCATGATGACGAGGCTTCTTCTTTGAATGCTTGA 687 0.4847 MKLPFLVKNKSEMRSSSSWPWPSCHQPRTLSFRANTADSDSKAAEVDPVETLVRGLRSDRRRLFFEPDETSSILETKASAEGGRVPFKDSFVLSMESRDPYDDFRKSMEEMVEAHSLKHLEALQELLFWYLRVNAKSNHDCILTAFVDLLVGLSPSSPSPCPSSSHLSFSTASMSSSFSTRCVNDSSLEAEEEVDATDQASTSASSSPQKVNEVLIDPHDDEASSLNA 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1070 228 Pfam Transcriptional repressor, ovate 97 153 IPR006458 -
Lele07g1070 228 MobiDBLite consensus disorder prediction 197 212 - -
Lele07g1070 228 MobiDBLite consensus disorder prediction 188 228 - -
Lele07g1070 228 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 39 154 IPR038933 GO:0045892
Lele07g1070 228 ProSiteProfiles OVATE domain profile. 93 152 IPR006458 -
Lele07g1070 228 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 93 154 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1070 Lele-ChrLele07 6455141 6455827 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele07g1070 Ovate 4e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1552 14 23498796 23499443 Lele07g1070 07 6455141 6455827 CCT
Lele15g0797 15 4604163 4604798 Lele07g1070 07 6455141 6455827 CCT
Lele16g0815 16 4564783 4565430 Lele07g1070 07 6455141 6455827 CCT
Lele07g1070 07 6455141 6455827 Lele07g1070 07 6455141 6455827 ECH
Lele05g1031 05 6406548 6408196 Lele07g1070 07 6455141 6455827 hybridization
Lele06g0893 06 5553768 5554463 Lele07g1070 07 6455141 6455827 hybridization