Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1052 ATGGAGGAGCGTTTCCTGAAGCTTGTTTCAGCACTCATTCTCTCTCTTGCTGTAGTGGGTTTTAGTGCCACTGATCCGAATGACGTGAAGATTCTCAACCAATTCAGGAAAGGCTTGGACAATCCGGAGCTTCTGCCGTGGCCTGAAGATGGTGGAGACCCATGCGGGAGCCCTCCTTGGAAGTACATCTTCTGCAAGGGAAATAGAGTTTCCCAGATTCAGGCTAAGAACTTGAACTTGAGTGGTCCTCTGCCTCAGAATTTCAACCAGCTCTCCATGCTGGAAAACATTGGCCTTCAGAACAACAAACTCAACGGGCCGTTACCGTCTTTCAGTGGGTTATCCAATTTGAGATATGCATACTTGGACTACAATGACTTCGATTCCATTCCCGCTAATTTCTTTGATGGGCTCGTGAGTCTGGAAGCTCTGGCATTGGATGATAATAATTTTAATGCCAGCACTGGATGGCAATTCCCCCCTCTGTTGCAAGATTCATCACAGTTAACCAACCTTTCCTGTATGAGCTGCAACTTAGCCGGTCCATTGCCTAGTTTTCTGGGGAATTTGTCTTCTTTGTCTATCCTGAAGCTTTCACGCAACAATTTAACTGGTGAAATTCCGGCGACTTTAAGTGGCTCGATTTTGCAGGTTCTATGGTTGAACGATCAGCTGGACGGCGGTCTTACTGGTTCTATTGATGTGGTGGCAACCATTACTTCGCTTACGAGTGTGTGGCTTCATGGAAATCACTTCACGGGGACGATTCCTAAGAACATTGGGGATTTAACTTCTCTCAAGGATCTCGATCTCAATTATAACCAGCTCGTTGGCCTAATCCCAGATGCTTTGGGTAAAATGAAACTCGACGGTCTTAATTTGAACAACAACCACCTAAACGGACCGATCCCAAATTTCGCGGCAGGCAAAGTTTCGTACGATTATAATTATTTTTGTCAACCCAAACCCGGCGTTCCTTGTGCCTTTGAAGTCATGGCACTTCTGGACTTTCTGGATGGATTGAATTATCCTTTAAATCTAGTTGAATCTTGGTCCGGTAATGACCCATGTAAAGGTCCATGGCTGGGACTAAAATGCGATGACTCTGGAAAGGTGTCAATGATTAATTTGCCCAAATTTAAACTCAATGGTACTCTGAGCCCCTCTCTTGCAAACTTAGGTTCTCTTGTTGAGATCAGACTGGGGGGCAACAATCTGAGTGGTCAAATACCTAGTAATTGGACTAGCTTGAATTCTCTTACCCTGTTGGATCTCAGTAACAATAACATTTCCCCTCCACTGCCTCATTTTAGCAGCAAGTTGAAACTCGTCGATACTGGCAACTCTTTATTGAATGGGAACCCAGAGGCCCCTTCATCTGGGAACAGCTCATCTTCTGGGAATTCTATTCCGTCAATTGATACTCCATCCTCGTCAACACGCACAAATCCCAGTCTCAATACTACTCCTGGATCACAAAATTCCACCAGGAAAATTTTGGTTGCAATTGTAGCCCCTGTTGCAGGTGTTGCGGCAGCAGCTTTTCTGCTCATTCCCCTGATATCTTGTTACAAGAGGAGAAAAGATAGCTCACTGGCTCCAAGTTCACTAGTAATCCACCCTAGAGATCCATCTGATTCAGACAATATGGTAAAGATTGCGGTAGCTAACAATACCTATGGAAGTACGTCCACGTTAACAGGGAGTGGGTCAGCAAGTAGAAACAGCAGTGGAACCGGGGAGTCTCATGTCATTGAAGCTGGAAATCTTGTGGTATCAGTTCAAGTTCTTCGAAATGTGACTAAGAATTTTGCCCCAGAGAATGAGCTTGGTCGTGGTGGATTTGGTGTTGTATACAAGGGAGAATTGGATGACGGGACTAAAATAGCAGTAAAAAGAATGGAAGATGGTATAATTAGTAACAAAGCGTTGGATGAATTTCAGTCTGAAATTGCAGTTCTGTCAAAAGTTAGACACCGTCATCTAGTGTCTCTCCTGGGTTACTCTGTTGAAGGTAATGAGAGAATTCTAGTTTATGAGTATATGTCTCAAGGGGCTCTCAGCAAACATATTTTTCAATGGAAGAGCCTTAAGTTGGAACCACTTTCTTGGAAAAGGAGGCTCAATATTGCATTGGATGTTGCTAGAGGAATGGAGTATCTCCATGGCCTGGCTCATCAGAGCTTCATTCACAGAGATCTTAAGCCCTCCAATATTTTGCTTGGGAATGATTTTAGAGCCAAAGTCTCCGACTTTGGATTGGTTAAACTTGCTCCTGATGGTGAAAAATCTGTCGTAACTCAGCTTGCTGGGACCTTTGGCTACTTAGCCCCAGAATATGCAGTGACGGGAAAAATCACAACCAAAGCAGACGTCTTTAGTTTTGGAGTTGTGTTAATGGAGTTGTTGACTGGATTGATGGCACTTGATGAGGATAGGCCTGAGGAAAGCCAATACTTGCCAGCATGGTTCTGGCACATAAAATCTGATAAGGAGAAACTTATGGCTGCTATTGATCCATCCCTTGACAAAAAAGAAGAAACTTTTGAGAGCATTACTGTCATTGCCGAGCTAGCTGGTCACTGCACTGCAAGAGAACCAGGCCAGCGACCAGATATGGGCCATGCTGTAAATGTTCTGGCTCCGCTCGTTGAAAAATGGAAACCCTTTGACGATGACACTGAGGAGTATTCTGGAATTGATTATAGTCTTCCCCTTAATCAGATGGTGAAGGGTTGGCAAGAGGCAGAAGGAAAGGACTCGAGTTACATGGACCTGGAAGACACTAAGGGTAGTATCCCGGCAAGGCCAACTGGATTTGCAGATTCTTTTACTTCCTCTGATGGTCGCTAA 2853 0.4444 MEERFLKLVSALILSLAVVGFSATDPNDVKILNQFRKGLDNPELLPWPEDGGDPCGSPPWKYIFCKGNRVSQIQAKNLNLSGPLPQNFNQLSMLENIGLQNNKLNGPLPSFSGLSNLRYAYLDYNDFDSIPANFFDGLVSLEALALDDNNFNASTGWQFPPLLQDSSQLTNLSCMSCNLAGPLPSFLGNLSSLSILKLSRNNLTGEIPATLSGSILQVLWLNDQLDGGLTGSIDVVATITSLTSVWLHGNHFTGTIPKNIGDLTSLKDLDLNYNQLVGLIPDALGKMKLDGLNLNNNHLNGPIPNFAAGKVSYDYNYFCQPKPGVPCAFEVMALLDFLDGLNYPLNLVESWSGNDPCKGPWLGLKCDDSGKVSMINLPKFKLNGTLSPSLANLGSLVEIRLGGNNLSGQIPSNWTSLNSLTLLDLSNNNISPPLPHFSSKLKLVDTGNSLLNGNPEAPSSGNSSSSGNSIPSIDTPSSSTRTNPSLNTTPGSQNSTRKILVAIVAPVAGVAAAAFLLIPLISCYKRRKDSSLAPSSLVIHPRDPSDSDNMVKIAVANNTYGSTSTLTGSGSASRNSSGTGESHVIEAGNLVVSVQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEDGIISNKALDEFQSEIAVLSKVRHRHLVSLLGYSVEGNERILVYEYMSQGALSKHIFQWKSLKLEPLSWKRRLNIALDVARGMEYLHGLAHQSFIHRDLKPSNILLGNDFRAKVSDFGLVKLAPDGEKSVVTQLAGTFGYLAPEYAVTGKITTKADVFSFGVVLMELLTGLMALDEDRPEESQYLPAWFWHIKSDKEKLMAAIDPSLDKKEETFESITVIAELAGHCTAREPGQRPDMGHAVNVLAPLVEKWKPFDDDTEEYSGIDYSLPLNQMVKGWQEAEGKDSSYMDLEDTKGSIPARPTGFADSFTSSDGR 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1052 950 ProSiteProfiles Protein kinase domain profile. 604 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1052 950 FunFam Leucine-rich repeat receptor-like kinase 329 454 - -
Lele07g1052 950 Pfam Leucine rich repeat 241 299 IPR001611 GO:0005515
Lele07g1052 950 SUPERFAMILY L domain-like 23 306 - -
Lele07g1052 950 MobiDBLite consensus disorder prediction 448 493 - -
Lele07g1052 950 Gene3D Ribonuclease Inhibitor 25 323 IPR032675 -
Lele07g1052 950 Gene3D Phosphorylase Kinase; domain 1 566 681 - -
Lele07g1052 950 PANTHER OSJNBA0070M12.3 PROTEIN 11 950 - -
Lele07g1052 950 SMART LRR_typ_2 114 137 IPR003591 -
Lele07g1052 950 SMART LRR_typ_2 190 214 IPR003591 -
Lele07g1052 950 SMART LRR_typ_2 263 286 IPR003591 -
Lele07g1052 950 SMART LRR_typ_2 138 161 IPR003591 -
Lele07g1052 950 SMART LRR_typ_2 393 416 IPR003591 -
Lele07g1052 950 SMART LRR_typ_2 417 441 IPR003591 -
Lele07g1052 950 Gene3D Ribonuclease Inhibitor 329 454 IPR032675 -
Lele07g1052 950 Pfam Leucine rich repeat N-terminal domain 331 367 IPR013210 -
Lele07g1052 950 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Lele07g1052 950 FunFam receptor protein kinase TMK1 682 899 - -
Lele07g1052 950 FunFam receptor protein kinase TMK1 566 681 - -
Lele07g1052 950 Pfam Protein tyrosine and serine/threonine kinase 607 878 IPR001245 GO:0004672|GO:0006468
Lele07g1052 950 FunFam Receptor-like kinase TMK4 26 324 - -
Lele07g1052 950 MobiDBLite consensus disorder prediction 917 950 - -
Lele07g1052 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Lele07g1052 950 SUPERFAMILY Protein kinase-like (PK-like) 579 880 IPR011009 -
Lele07g1052 950 Gene3D Transferase(Phosphotransferase) domain 1 682 900 - -
Lele07g1052 950 CDD STKc_IRAK 610 883 - -
Lele07g1052 950 SMART serkin_6 604 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1052 950 SUPERFAMILY L domain-like 330 442 - -
Lele07g1052 950 ProSitePatterns Protein kinases ATP-binding region signature. 610 632 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1052 Lele-ChrLele07 6353161 6356406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1052 58 917 Receptor kinase-like Gene Family AT1G55610 30.185 2.85e-82 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lele07g1052 PK_Tyr_Ser-Thr 6.4e-46 CL0016