Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1045 ATGGATCAAGTTGAGATTCCTGAGTATTTCATTTGTCCCATATCCCTCCAAATCATGAAAGATCCCGTTACTGCTGCTACCGGCATCAGTTACGATCGTGAAAGCATCGAACGCTGGCTCTTCACCTCCAACAACACCACTTGCCCTGTAACCAAACAGACCTTGCCGTTAGACTCTGACTTGACCCCCAACCACCCCCTTCGCCGCCTCATTCAGGCTTGGTGCAATCAGAATGCCTCCCTCGGCGTCGTTCGTATTCCCACCCCCAAACCTCCCCTCGACAAGTTTCAGTTACTCAAAATCCTCTCTCACCTTCGCAGTCCTCACTTGTATCTCAAAGCTCTCCGACAGTTAGAACTGCTCGCCGCCGAGAACCACCGGAATAAGCGGTGTTTGGTGGAGGCTGGTGTTCCAAGAGCCATGGTGCTGTTCGTTTTGGACTGTTTTCAGAAACGATGGATTCGCGAGGGGCTCGAAGAGGCTCTCAGTTTGTTGCAGTTTGTGAAGGTTCCCCAAGAGGAAATCAGGCTGCTTCTGCAGCAAAATGAGCAGGTTTTGGATTCTATCACGTGGGTTTTAGCCTCTGAAATAATGGACAACTCTGTGACTCTCAAGTCCCACGCGATTACAGTGCTCAAAACGATCATCCAGAAGGCCAGCTCCTGCGTCATGGAGAGACTCAAACCTGAGTTCTTTGAAACAGTTGTGAAAGTCCTACGAAATGGAATAACCCTACAAGGGATGAACGCTGGTCTGAAAGTGCTGTTAGCAGCTTGTCCGTGGGGAAGAAATCGCGAGTTGATGGTGGAAGCCGGTGCAGTTCATGAGTTGATTGAGATTGAACTGGGGACGCCGGAGAAGACAACGACGGAGCTGATATTAGGAATACAGTTTCATCTGTGTTCTTGCGCCAATGGGAGAGCACAGTTCGTGAGCCACAGAGGCGGCATTGCGGTGTTGACGGAGAGAATATTGAAGGTGTCACCAGCGGCCGATGAAAGAGCCATATTTGTTTTGTCACAGGTATCGAAAGCATGTGCTTCGCAAATAGTAATCCAAGAGATGGTTCAGCTGGGGACTTTGTCGAAGCTCTGCATGTTGCTTCAGGCAGATCATCCTTCGTATCTAAAAGACAAAGCAATGGAGATCCTCAAGACCCATTCTGAGGTTTGGAAGAACTCGCCTTGTTTTCGTGTATCTTTTAAAGCAAGTTTGCACAGTCGACTCCATTTATTCCCAACGTTCCTAACGGGGCTAAAGCAGAGGAGGGAGAATCTGATTAATGCTCTGAAGCAGCGCAAGGGGAAATCTGATCGAGGAGAATCGACAAGTGAATCACTTTTGGTCAGAGGAAGAGACGCTATACCTAAGCCACCCAATGGCTTCCTTTGA 1392 0.4892 MDQVEIPEYFICPISLQIMKDPVTAATGISYDRESIERWLFTSNNTTCPVTKQTLPLDSDLTPNHPLRRLIQAWCNQNASLGVVRIPTPKPPLDKFQLLKILSHLRSPHLYLKALRQLELLAAENHRNKRCLVEAGVPRAMVLFVLDCFQKRWIREGLEEALSLLQFVKVPQEEIRLLLQQNEQVLDSITWVLASEIMDNSVTLKSHAITVLKTIIQKASSCVMERLKPEFFETVVKVLRNGITLQGMNAGLKVLLAACPWGRNRELMVEAGAVHELIEIELGTPEKTTTELILGIQFHLCSCANGRAQFVSHRGGIAVLTERILKVSPAADERAIFVLSQVSKACASQIVIQEMVQLGTLSKLCMLLQADHPSYLKDKAMEILKTHSEVWKNSPCFRVSFKASLHSRLHLFPTFLTGLKQRRENLINALKQRKGKSDRGESTSESLLVRGRDAIPKPPNGFL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1045 463 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 81 IPR013083 -
Lele07g1045 463 CDD RING-Ubox_PUB 10 53 IPR045210 -
Lele07g1045 463 MobiDBLite consensus disorder prediction 431 463 - -
Lele07g1045 463 ProSiteProfiles U-box domain profile. 5 81 IPR003613 GO:0004842|GO:0016567
Lele07g1045 463 SUPERFAMILY RING/U-box 3 79 - -
Lele07g1045 463 SMART Ubox_2 9 74 IPR003613 GO:0004842|GO:0016567
Lele07g1045 463 Pfam U-box domain 6 78 IPR003613 GO:0004842|GO:0016567
Lele07g1045 463 SUPERFAMILY ARM repeat 98 374 IPR016024 -
Lele07g1045 463 MobiDBLite consensus disorder prediction 431 446 - -
Lele07g1045 463 PANTHER WDSAM1 PROTEIN 3 398 IPR045185 GO:0061630
Lele07g1045 463 Gene3D - 96 399 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1045 Lele-ChrLele07 6298515 6302151 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1045 2 407 U-box Gene Family AT3G11840 42.129 6.02e-117 349