Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1038 ATGAACGACCTGTTCTCCGGCTCGTTCTCCCGCTTCCGCGGCGAGCAAGTCTCGCCGGACAACCAGCACCACGTCATCCAGATGGCGGACACGTCGCCGTCGAAGGACGGAGTCAACCTGGACAAATTCTTCTCGGAAGTGGAGTCAGTCAAGGAGGAGCTCAAGGAGCTGGAGAGGCTCAACCAGAGCCTCCGTGGATCCCACGAACACAGCGAGACTCTTCACACCGCCGAATCCGTCAAGGAGCTTCGGTCTCGCATGGACGCCGACGTCGCCCTCTCTCTCAAGAAGGCTAAGCTCATTAAGGTACGCTTGGAAGCACTGGACCGCTCCAACGAAGCCAACCGGATCCTGCTGGGCCGCGGACCCGGCTCTTCGTCCGACCGCACTCGGACCTCCGTCGTGAGCGGCTTGAGAAAAAAGCTGAAAGACTCCATGGACAGCTTCAACAACCTCCGCCAAAAGATATCCTCAGAGTACAGGGAAACCGTGCAACGTAGGTACTTCACCGTCACCGGCGAGAATCCCGACGAGAAAACCATTGACCTGCTCATCTCCACTGGTGACTACCATGCCTGCTTCTTCTTTCTTATGCTTCTAATAAACACATTCTAA 615 0.5642 MNDLFSGSFSRFRGEQVSPDNQHHVIQMADTSPSKDGVNLDKFFSEVESVKEELKELERLNQSLRGSHEHSETLHTAESVKELRSRMDADVALSLKKAKLIKVRLEALDRSNEANRILLGRGPGSSSDRTRTSVVSGLRKKLKDSMDSFNNLRQKISSEYRETVQRRYFTVTGENPDEKTIDLLISTGDYHACFFFLMLLINTF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1038 204 SMART SynN_4 35 161 IPR006011 GO:0016020
Lele07g1038 204 Pfam Syntaxin 42 190 IPR006011 GO:0016020
Lele07g1038 204 CDD SynN 40 195 IPR006011 GO:0016020
Lele07g1038 204 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 37 167 - -
Lele07g1038 204 SUPERFAMILY t-snare proteins 40 190 IPR010989 GO:0016020|GO:0016192
Lele07g1038 204 Coils Coil 40 67 - -
Lele07g1038 204 Gene3D - 36 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1038 Lele-ChrLele07 6249854 6250468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1038 28 189 SNARE and Associated Proteins AT3G11820 74.074 1.79e-81 243