Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1026 ATGGAAAAGAAACGGGAGATTGTGCAGTATAGGGAGAGACTGGACAAGACACTTTCCTTACCTGATCTGAGAAACGAGGAGGCGCTAAAAGCCCTTGTCAAAAGGCAACTACGTTCTTCAGGACAAGAAATAGGATATGAGTACGAGGAGGAAGCAGTGGAAACCAGGGCTGCAGAAGTGTCCAAGTTTCTTGATATGTTGAGGAGTGTTTCTGCAGATGGTAGGGACAGATCTAAAACATCACACAAGGATTGGAAATTGAAACAAGATAATGAAGAGTTTCGTGTTATGTATCGTGAAGGACTAGAGGGAACTCCTTTTCATACATTGCTAGCTGAAGGCTACGTTGATGGGCCCATAGATGTTTACACCCCTTTACAAGAAATGGTGGGTGTCATGCTTTGTCATATTTATGCTTTTGATGAACTTTTGTGGCCTCAGTTTACTGTTCCCACTTTCAAAATCATGTCGAGTGACTGTTTGCAGAGGGTCCGGATTGGGGAACAATTATGTCTAGTAAGGTTGAAGCTTTCATGGCCACTTTCCACAAGGGAGGCTGTTATGCACTATTATCTGTTTGAGTACTTCCAGGATGACTTAATTGTTGTCATTATAAATACGATTCCTGATTCAAAGAGCTTCAATGGGCACCTTTATGGATTCAACAATGAAGCAATTCCTGATGCAAACGGTGTGGTTAGAATTGAAGTGGTGGGAGGCTTTGCTTTGCAAAAGGTGACTTCAGAAAGAAGTTATTTTCGGACGATAGCAAACATGGATATAAAGTTGGATATTGTACCTCCATCACTTATCAACTTCATCTCAAGACAGCTCATTGGCAGTGGATTCAGACTTTATAAGAAGTCAGTGGCTTCAATGATGGACCATGATGAAGGATTTATTAAGGCTTTGGATGAGCCATTATATTCGAGACTTCGTGAAGCTCTTTATGTTATTAATGGGTCAAAGGAGGCTATGGGTGCCCAAGTTGTAGACATTCTCCCAGCTGAAGATGTTATTAGAAGTAAGCAAGATGAGACAAAAGATGTGTCTCAGGAAGATGAGGGCAACCATCATGCAGATAACTTCGCATCAATGAATGGGGAAGCACTAGATAGTAGCAATGCATATGGTGAGATTGTGGAGCAAGATGGTGAAGAAACTGAGCACATTGAAGAGGATGACGGGAAAGTGAAAGACATTCCAATTAAGGAAGTTAATGCGAGTCAGTTAAAGGGCAAAAGGGATGTACGTATCAGAGCCGAGGTAGAGCAGGCTCTTGAAACATTAGAGAGGGCCATTTCAGCTTTTCGAGAATATGGATTTCATTCCCCCCAGCCCACTCCTAGCTTCAACTTCACCTATGAAGAGTCTCCCTCCAAGGAAAAGGATGACCAACTTTACATATATTCCTCAAAACTTGGTCAATTGGGTTCTGAAAATGAGGTTAGTACTGTCAAGGTATTAAACAAAGAGATACTGGAGGAAAATTCTCAAGAAGCACTTGGGAATAACCCTGACATTCACAGCTCAAGGCGAACAGGTACAAATTCTAATTTAAAGGAAGTAACCTACAACAAAGTAGTACCAGCTTCTCCGGAGCAGAATGTTATATGTTCCTTGGAAAATGGGGCAACAGAGACCCCAACTTTGGACCAAAAAACTCTGGACAGTAACAAGCCATCAGACGGCGATGCAGTCCAAGATATGTCGTCTGATCAACCAAAGAAGCCAAGCAGGCTAAAAAAGCATAAATACTGTTGAATAACAGTTGAAACCTGTGTCTTATCCCTTGCTTCCTTTTGTCTGGTCTTTTCTCTTGGTGGGCCTGGTGAAGTGATTCAATCAAACAAGGAGTATACTGAAGAAAATGTCACTGATGCGGTTCAGAGGGGAGGGTCATTCGTGTTTGGGTCATCAGGGATGCAAAGTGACATTGAGGCCCTTGAACGTAACTTCTTTGGAGGTCTCAGTCGTGTTTTTGAAGCAGCTGAAGGAATGAGCAATGGCTTCTTCGATGTGTTTGCAAGGGCTCCACGAATATTTGATGGGGACTCATCCTCCATGAGGAAGGTCTTCCAAAAGCTATCCTATCCCTCGGACTGGAAGAATTTCCACGGCAGGAAGCCTCTTCTAAACCCAAACCCAAAGAATACGGAGCAATGGATGCTGATCTATCTGGATTGGCTAAAGACTTCACTTTGGTGGTCACGACCAACTGGGGATATGGTTTCTCCTACCAGTAAATCATCGTCCAGAAGCGAAGTTCCAAATGTTCCAGAGATTTTTCAAAACAGCCCACCCGAGATATTGAGAATCGACAAGGTAGATACGAAACCAATACAGGAGATAAAACCACCTCCACCTCAAAAACAGGACGAAGAGACTAAATCTTCCAAGCCACCAATGGAGGAATCAAGACAACCCCAGTCGGTGAAGCTGAGGCAAACGGAAGAGGGTGGACCGATTCCGACCAGTGTACAAAAGGAAGAGATTATTCAACAAGCGGAACCTAAAAAACCAAAGAGGCCCCACAGGGTGAAGAGGCTCGCATCTGCAGGGCTGCAAGCAGATTCTGTTTTGCAAACAAAAACAGGTCATCTTAAGGAGTTCTATAAACTGGGGCGAAAGCTTGGACGTGGGCAATTTGGAACGAGGGCTTATGAGGATCCTGTTGCAGTTCATGTTGTGATGGAACTATGTGCAGGGGGTGAACTGTTTGATAGGATTGTGGAAAGAGGGCATTACACTGAAAGAAAAGCAGCAAAACTTGCCAGGACTATAGTTAGTGTTATAGAAGCTTGTCACTCCCTTGGAGTTATGCATCGCGATCTTAAACCCGAGAATTTCCTTTTCGTTAGAGAAACTTTCTCAGACGTTGTAGGAAGTCCTTATTACGTTGCACCAGAAGTTCTGTGCAAGTGTTATGGTCCAGAAGCAGATGTGTGGAGTGCTGGTGTGATGATTTATATTCTTTTATGTGGGGTTCCTCCATTTTGGGCTGTGGTAACAGAAACAGAGGAGGATATATTCAAGGAGGTTTTGGAAGGGAAGCTTGATTTCTCATCATATCCTTGGCCTAAAATCTCAGACAGTGCTAAGGACTTAGTGAAGAAGATGCTTACTAGAGATCCAAGAAAACGGATAACTGCTCATGAAGTTCTTTGTCATCCTTGGATACGAGTTGATGGTGAAGCTCCAGACAAACCTCTTGATTCAGCGGTCTTGAGTCGGTTGAAGCAGTTTTCTGCCATGAATAAGCTCAAGAAAATGGCTATAAGAGTGATTGCAGAGAAGCTCTCTGAAGAAGAAATTGCAGGGTTGAAAGAAATTTTTAAGATGATAGACACAGACAACAGTGGTCAAATTACATTCGAAGAACTAAAGTATGGAATGAAAAGATTTGGTGCTGATCTGAATGAAGCAGAAATACATGATCTAATGCAAGCCGCAGATGTTGATAACAGTGGAACAATTGACTACAAAGAATTCATAGCTGCCACATTGCATTTAAATAAAATAGAGAGAGAAGACCACTTAGTTGCAGCATTCTCATACTTTGATAAAGATGGAAGCGGCTATATCACACCAGATGAGCTTCAACAAGCTTGCCAAGAATTTGGCATAGAAGATTTCCACTTGGAAGAAATCATCAGAGAAGCAGATCAAGATAACGATGGGCAAATAGATTACAAGGAATTTGCAGCAATGATGCAGAGAGGCAACACAGAGATGGGGAAAAAGGGGCAGGTTGGGTTGTTCTGTATACTTGTGGATAGGTTGCTTCATGGGCATTGTGGTCCTAATATTGTTATTAATGATGATTGGTGGGGGGTGTAA 3840 0.4263 MEKKREIVQYRERLDKTLSLPDLRNEEALKALVKRQLRSSGQEIGYEYEEEAVETRAAEVSKFLDMLRSVSADGRDRSKTSHKDWKLKQDNEEFRVMYREGLEGTPFHTLLAEGYVDGPIDVYTPLQEMVGVMLCHIYAFDELLWPQFTVPTFKIMSSDCLQRVRIGEQLCLVRLKLSWPLSTREAVMHYYLFEYFQDDLIVVIINTIPDSKSFNGHLYGFNNEAIPDANGVVRIEVVGGFALQKVTSERSYFRTIANMDIKLDIVPPSLINFISRQLIGSGFRLYKKSVASMMDHDEGFIKALDEPLYSRLREALYVINGSKEAMGAQVVDILPAEDVIRSKQDETKDVSQEDEGNHHADNFASMNGEALDSSNAYGEIVEQDGEETEHIEEDDGKVKDIPIKEVNASQLKGKRDVRIRAEVEQALETLERAISAFREYGFHSPQPTPSFNFTYEESPSKEKDDQLYIYSSKLGQLGSENEVSTVKVLNKEILEENSQEALGNNPDIHSSRRTGTNSNLKEVTYNKVVPASPEQNVICSLENGATETPTLDQKTLDSNKPSDGDAVQDMSSDQPKKPSRLKKHKYCXITVETCVLSLASFCLVFSLGGPGEVIQSNKEYTEENVTDAVQRGGSFVFGSSGMQSDIEALERNFFGGLSRVFEAAEGMSNGFFDVFARAPRIFDGDSSSMRKVFQKLSYPSDWKNFHGRKPLLNPNPKNTEQWMLIYLDWLKTSLWWSRPTGDMVSPTSKSSSRSEVPNVPEIFQNSPPEILRIDKVDTKPIQEIKPPPPQKQDEETKSSKPPMEESRQPQSVKLRQTEEGGPIPTSVQKEEIIQQAEPKKPKRPHRVKRLASAGLQADSVLQTKTGHLKEFYKLGRKLGRGQFGTRAYEDPVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARTIVSVIEACHSLGVMHRDLKPENFLFVRETFSDVVGSPYYVAPEVLCKCYGPEADVWSAGVMIYILLCGVPPFWAVVTETEEDIFKEVLEGKLDFSSYPWPKISDSAKDLVKKMLTRDPRKRITAHEVLCHPWIRVDGEAPDKPLDSAVLSRLKQFSAMNKLKKMAIRVIAEKLSEEEIAGLKEIFKMIDTDNSGQITFEELKYGMKRFGADLNEAEIHDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLVAAFSYFDKDGSGYITPDELQQACQEFGIEDFHLEEIIREADQDNDGQIDYKEFAAMMQRGNTEMGKKGQVGLFCILVDRLLHGHCGPNIVINDDWWGV 1279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1026 1279 SUPERFAMILY Protein kinase-like (PK-like) 864 1081 IPR011009 -
Lele07g1026 1279 MobiDBLite consensus disorder prediction 342 360 - -
Lele07g1026 1279 ProSiteProfiles EF-hand calcium-binding domain profile. 1139 1174 IPR002048 GO:0005509
Lele07g1026 1279 ProSitePatterns Serine/Threonine protein kinases active-site signature. 940 952 IPR008271 GO:0004672|GO:0006468
Lele07g1026 1279 ProSitePatterns EF-hand calcium-binding domain. 1152 1164 IPR018247 -
Lele07g1026 1279 SMART serkin_6 872 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1026 1279 ProSiteProfiles Protein kinase domain profile. 756 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1026 1279 FunFam Calcium-dependent protein kinase 1 1068 1242 - -
Lele07g1026 1279 MobiDBLite consensus disorder prediction 788 802 - -
Lele07g1026 1279 ProSiteProfiles EF-hand calcium-binding domain profile. 1175 1210 IPR002048 GO:0005509
Lele07g1026 1279 Gene3D - 1067 1244 - -
Lele07g1026 1279 ProSiteProfiles EF-hand calcium-binding domain profile. 1213 1244 IPR002048 GO:0005509
Lele07g1026 1279 SMART efh_1 1179 1207 IPR002048 GO:0005509
Lele07g1026 1279 SMART efh_1 1213 1241 IPR002048 GO:0005509
Lele07g1026 1279 SMART efh_1 1107 1135 IPR002048 GO:0005509
Lele07g1026 1279 SMART efh_1 1143 1171 IPR002048 GO:0005509
Lele07g1026 1279 CDD EFh 1108 1167 IPR002048 GO:0005509
Lele07g1026 1279 Gene3D Phosphorylase Kinase; domain 1 886 900 - -
Lele07g1026 1279 ProSiteProfiles EF-hand calcium-binding domain profile. 1103 1138 IPR002048 GO:0005509
Lele07g1026 1279 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 1 562 - -
Lele07g1026 1279 MobiDBLite consensus disorder prediction 740 761 - -
Lele07g1026 1279 ProSitePatterns EF-hand calcium-binding domain. 1222 1234 IPR018247 -
Lele07g1026 1279 Coils Coil 420 440 - -
Lele07g1026 1279 ProSitePatterns EF-hand calcium-binding domain. 1188 1200 IPR018247 -
Lele07g1026 1279 MobiDBLite consensus disorder prediction 538 579 - -
Lele07g1026 1279 SUPERFAMILY EF-hand 1099 1240 IPR011992 -
Lele07g1026 1279 MobiDBLite consensus disorder prediction 497 520 - -
Lele07g1026 1279 FunFam Calcium-dependent protein kinase SK5 967 1065 - -
Lele07g1026 1279 MobiDBLite consensus disorder prediction 538 574 - -
Lele07g1026 1279 Pfam Protein kinase domain 887 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1026 1279 Gene3D - 82 295 IPR023393 -
Lele07g1026 1279 Gene3D Transferase(Phosphotransferase) domain 1 901 1060 - -
Lele07g1026 1279 Pfam EF-hand domain pair 1108 1168 IPR002048 GO:0005509
Lele07g1026 1279 Pfam EF-hand domain pair 1180 1239 IPR002048 GO:0005509
Lele07g1026 1279 MobiDBLite consensus disorder prediction 342 402 - -
Lele07g1026 1279 MobiDBLite consensus disorder prediction 740 851 - -
Lele07g1026 1279 ProSitePatterns EF-hand calcium-binding domain. 1116 1128 IPR018247 -
Lele07g1026 1279 SUPERFAMILY Bet v1-like 80 289 - -
Lele07g1026 1279 CDD EFh 1179 1239 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1026 Lele-ChrLele07 6169020 6179511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1026 726 1253 EF-hand Containing Proteins AT3G10660 55.962 0.0 662
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele07g1026 Pkinase 1.3e-40 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1591 13 24942514 24947416 Lele07g1026 07 6169020 6179511 CCT
Lele14g1525 14 23343920 23347862 Lele07g1026 07 6169020 6179511 CCT
Lele15g0827 15 4781396 4785410 Lele07g1026 07 6169020 6179511 CCT
Lele16g0844 16 4721565 4725338 Lele07g1026 07 6169020 6179511 CCT
Lele05g0991 05 6115918 6119504 Lele07g1026 07 6169020 6179511 hybridization
Lele06g0849 06 5266205 5270614 Lele07g1026 07 6169020 6179511 hybridization