Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1024 ATGATGGGATTGGGAGTGATAGGGAAAGTGGGCATCAAAGTTGAGGATTCTTCAAAAAGGCTACGTTCCAATGCTACAAGTACTCGTGTGGTCCCTTCTTCCCACTTCACATCACTTTCTGCCCTACTTGAAGTCAATGAACAATTGACCCTTTTGTTCCCCGTTGTGGAAAAGGACTTTTTTATCATTTCTTATTTCAAGGCTTCCTGTCTTTGCTGTGTGTCTGGGTTCAACCCCAAGGGGTCATTGTTTCTAACAGGGGTTGATCCCAATACATTTTTTGTCTCCAAAAGGCAACAAAACATTGCATTTTCTGGCTCTGAAGTTTGGGCTGATGTATTGAAGGTTCCGGACATGGAAGACAAGAACAATGAAAGTCATATGACATCAGCTGCAGCCTTTGTGGAAGGGGGCATTCAAGAAGCATGTGATGACTCTTGCAGCATATGCCTTGAGGATTTTAGTGAAATTAATCCTCCAACGGTTACTACTTGCAAGCATGATTTTCACCTGCAGTGCATTCTTGAATGGTGTCAGAGGAGCTCCCAGTGCCCTATGTGTTGGCAGTCTATTAGTTTCAAGGATTCTACCAGTCAAGTATTGTTTGAGGCAGCGGTTCAGGAAAGGAATTTGAGAGCTACTTCCTCAAGAAATGCAACTATTTTCCATCATCTAGGTCTTGGTGATTTTGACTTGCAGCATTTATCCATGGGAGTAAGTGGAGCAGATATTGGAGAGAGGATAATTCAACATTTAGCTGCTGCTACAGTCATGGGAAGAGCCCGTCACCTTGGTCGGAGAGAAGGAAGTAGGACTAGGTCGTTTCCTCATGGTCGTCCTCCCTTCATAGTCTTCTCAACTCCTCCACCTGGTGCTGTTTCAGCTGCCGGAGGGGGGACTGAACCAGCTGCAATTCCTGTAGGAAATCCATCTACCCCACTTACATCTGAAGGAGATGAACCATCACAGCAGATCCCAAGCCTTCAAACGCACAGTTCTTTACGTGACGGATCTACTGTCATGTCTACGAATCGTGAAGGAATTCTTTTCAATGATCGAAGTTCTGCTGTCCATTCTGTACCACCTGATGAAGGCAGAGCAGGGCCATCAGAACTTCAGTCATTTTCCGAGTCTCTGCGATCCAGACTTGGTTCGGTGTCTATGAGATACAAAGAGACTATTTCAAAGGGCACGAGGGGATGGAAGGAAAGGCTGTTCTCTCGTAGTACTTCCATGTCTGATATCGGCTCAGAAGTTAGGAGAGAGTTGAACGCTGGAATTGTTAGTGTGTCCCGATTGATGGAGCGCCTTGAAAAAAGAGAAAAGAACAATAGAGCAGGGGATAGTTCTCTGTCAAATCATGTGGCTGCAGAGACAAGCAACCCAAAAAATCGTGAAGCTCATGAGGTTAGCACTGTGTGTGACAACACTCCAGCTGCTTGTTCTGCTGGCCCACGTTCAGGCTGA 1467 0.4567 MMGLGVIGKVGIKVEDSSKRLRSNATSTRVVPSSHFTSLSALLEVNEQLTLLFPVVEKDFFIISYFKASCLCCVSGFNPKGSLFLTGVDPNTFFVSKRQQNIAFSGSEVWADVLKVPDMEDKNNESHMTSAAAFVEGGIQEACDDSCSICLEDFSEINPPTVTTCKHDFHLQCILEWCQRSSQCPMCWQSISFKDSTSQVLFEAAVQERNLRATSSRNATIFHHLGLGDFDLQHLSMGVSGADIGERIIQHLAAATVMGRARHLGRREGSRTRSFPHGRPPFIVFSTPPPGAVSAAGGGTEPAAIPVGNPSTPLTSEGDEPSQQIPSLQTHSSLRDGSTVMSTNREGILFNDRSSAVHSVPPDEGRAGPSELQSFSESLRSRLGSVSMRYKETISKGTRGWKERLFSRSTSMSDIGSEVRRELNAGIVSVSRLMERLEKREKNNRAGDSSLSNHVAAETSNPKNREAHEVSTVCDNTPAACSAGPRSG 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1024 488 MobiDBLite consensus disorder prediction 291 339 - -
Lele07g1024 488 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 225 IPR013083 -
Lele07g1024 488 SMART ring_2 147 187 IPR001841 -
Lele07g1024 488 Pfam Ring finger domain 145 187 IPR001841 -
Lele07g1024 488 ProSiteProfiles Zinc finger RING-type profile. 147 187 IPR001841 -
Lele07g1024 488 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 124 195 - -
Lele07g1024 488 SUPERFAMILY RING/U-box 139 196 - -
Lele07g1024 488 MobiDBLite consensus disorder prediction 355 374 - -
Lele07g1024 488 MobiDBLite consensus disorder prediction 309 339 - -
Lele07g1024 488 MobiDBLite consensus disorder prediction 440 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1024 Lele-ChrLele07 6157271 6162399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1024 144 195 C3H Transcription Factor Family AT4G00335 48.077 4.14e-13 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1024 07 6157271 6162399 Lele07g1024 07 6157271 6162399 ECH
Lele05g0987 05 6099250 6102075 Lele07g1024 07 6157271 6162399 hybridization
Lele06g0845 06 5247227 5250450 Lele07g1024 07 6157271 6162399 hybridization