Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1021 ATGGGACGCGGAATGAATGAGGCCTCGCCTTCTTCTAGTTCTCATCACAACTTTTTTTTGCCAGAAACGAGTGGAGATCGCTCAGGAATGGAGAAGACAAATTCGAGTGGGTTGGCGAGGACGAAGTCGGAGCAGCTAGTGAAGACGGTGGTTGCAGAGCTGAAGTCAGCGCCATCGAGCGACTCAATGAACGGGATAATGGATAGTGGGGGAAGCGGAGGAACACTGTCGAGGAAGTCAAGTAGGAGGATGTCGCCGGTAGGGAAAAACAGCCACATAAGGAAGAGTAGGAGTGCTCAGATAAAGGTGGATTTGGATGAAGTAGGAAGCGGAGCCGCCCTGAGCCGAGCTTCCAGCGCCAGCTTGGGCCTCTCCTTCTCCTTCACCGGCTTCACGCTTACTCCTGATGAAATCACTGACTCTAAGCCCTTAAGGGACCAAGACATCCCTGAGGATATTGAAGCTGGAACTTGCCACTTCAAGTTTCCAACGGAAACCACTTTGCCTATTTTTCTCAAGTTCAAGGATGTGAGCTACAAGGTGGTGATCAAGGGCATGACAACAAGTGAGGAGAAGGATATCTTAAATGGGATTACTGGTTGCGTGAATCCAGGCGAAGTTTTGGCACTGATGGGACCCTCAGGGAGTGGAAAGACTACCCTTTTGAATCTTCTAGGTGGCCGGTTGATTCAGTCCACTGCTGGTGGTTCTATCACTTACAATGACCAGCCATATAGCAAATATCTCAAAAGCAAGATAGGATTTGTGACTCAAGATGATGTTCTGTTTCCTCATCTAACTGTGGAAGAAACACTTACATACTCAGCCCGTCTGCGACTTCCTGATACATTAACAAAGGACCAGAAGGAAAAACGAGCCTTGGATGTCATCTATGACCTTGGCTTAGAAAGGTGCAAAGGCACTATGATCGGTGGCTCCTTTGTTCGGGGGGTATCTGGAGGAGAGAGGAAAAGAGTTTGCATCGGTAATGAGATTATAATCAATCCTTCGCTTCTCTTTCTGGATGAGCCAACTTCTGGTTTGGATTCTACAACAGCCTTGAAGATCGTTCAGATGCTACAAGACATAGCAGAGGCTGGTAAAACAGTGGTGACAACAATTCACCAACCATCAAGCAGACTATTTCACAAATTTGATAAGTTGATCCTACTGGGAAAAGGCAGCTTGCTTTACTTTGGCAAAGCATCTAAAGCAATGCCTTATTTCCAATCTATAGGATGCTCGCCTCTTATTGCCATGAACCCAGCAGAGTTTTTGCTAGACCTCGCAAATGGAAACATAAATGATGTTTCTGTACCCTCTGAGTTAGAGGATAAAGTGCAGATGGGAAATGCAGAAGTTAGAACAAAGAATGGGAAACCATCACCAGCAATGGTACAAGAGTATCTAGCGGAAGCATACGAGTCTCGAGTTTCTGAAACAGAGAAGAGAAAGCTAATGGTCCCCATCCCCCTTGATGAATCACTGAAGTCTAAGGTTTGTTCTCCTAAAAGACAATGGGGTGCAAGGTGGTGTGAGCAGTATTCCATACTGTTCTGCAGAGGAATAAAAGAGCGGAGGCACGACTATTTCAGCTGGTTAAGAATCACCCAAGTTCTCTCTACTGCTGTCATCTTAGGATTACTTTGGTGGCAATCAGATGCTAACAATCCAAAAGGTCTTCAAGACCAGGCAGGGTTACTTTTCTTCATAGCGGTGTTCTGGGGATTCTTTCCGGTGTTCACAGCAATATTCACATTTCCTCAAGAGAGAGCAATGTTGGCAAAGGAGAGAGCAGTTGACATGTACAGGCTAAGTGCATATTTTGTGGCTAGGACTACAAGTGATGTACCATTGGACTTAATACTACCAGTTCTGTTCCTGCTGGTTGTCTATTTCATGGCCGGTCTGAGACTAAGTGCCGAATCCTTTTTCTACAGCATTCTCACTGTCTTCCTCTGCATTGTGGCAGCTCAGGGACTTGGACTCGCCATAGGGGCCACACTAATGGACTTGAAGAAAGCAACAACTCTGGCTTCAGTGACTGTGATGACCTTCATGCTGGCCGGAGGATTTTTTGTAAAGGAAGTGCCGAAATTCATATCGTGGATTCGGTACATTTCATTTAACTACCACACATACAAACTTTTGCTGAAAGTGCAATATGGAGGGCTCTCGCGAGGCATAAATGGGATGAGAATTGACGATGGTTGGACAGAGGTTGGTGCTCTGATAGCAATGGTTTTTGGCTATCGGTTATTAGCGTACCTTTCGCTGCGGCGGATGAAGCTTCCATGCGGAGCTTAG 2307 0.4612 MGRGMNEASPSSSSHHNFFLPETSGDRSGMEKTNSSGLARTKSEQLVKTVVAELKSAPSSDSMNGIMDSGGSGGTLSRKSSRRMSPVGKNSHIRKSRSAQIKVDLDEVGSGAALSRASSASLGLSFSFTGFTLTPDEITDSKPLRDQDIPEDIEAGTCHFKFPTETTLPIFLKFKDVSYKVVIKGMTTSEEKDILNGITGCVNPGEVLALMGPSGSGKTTLLNLLGGRLIQSTAGGSITYNDQPYSKYLKSKIGFVTQDDVLFPHLTVEETLTYSARLRLPDTLTKDQKEKRALDVIYDLGLERCKGTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALKIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASKAMPYFQSIGCSPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQMGNAEVRTKNGKPSPAMVQEYLAEAYESRVSETEKRKLMVPIPLDESLKSKVCSPKRQWGARWCEQYSILFCRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDANNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLAKERAVDMYRLSAYFVARTTSDVPLDLILPVLFLLVVYFMAGLRLSAESFFYSILTVFLCIVAAQGLGLAIGATLMDLKKATTLASVTVMTFMLAGGFFVKEVPKFISWIRYISFNYHTYKLLLKVQYGGLSRGINGMRIDDGWTEVGALIAMVFGYRLLAYLSLRRMKLPCGA 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1021 768 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 113 756 - -
Lele07g1021 768 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 410 IPR027417 -
Lele07g1021 768 SMART AAA_5 204 395 IPR003593 -
Lele07g1021 768 MobiDBLite consensus disorder prediction 1 96 - -
Lele07g1021 768 CDD ABCG_EPDR 169 400 - -
Lele07g1021 768 ProSitePatterns ABC transporters family signature. 318 332 IPR017871 GO:0005524|GO:0016887
Lele07g1021 768 Gene3D - 171 411 IPR027417 -
Lele07g1021 768 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 172 418 IPR003439 GO:0005524
Lele07g1021 768 MobiDBLite consensus disorder prediction 55 94 - -
Lele07g1021 768 Pfam ABC-2 type transporter 514 722 IPR013525 GO:0016020|GO:0140359
Lele07g1021 768 Pfam ABC-2 type transporter 375 479 IPR043926 GO:0140359
Lele07g1021 768 MobiDBLite consensus disorder prediction 1 43 - -
Lele07g1021 768 Pfam ABC transporter 195 346 IPR003439 GO:0005524
Lele07g1021 768 FunFam ABC transporter G family member 22 182 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1021 Lele-ChrLele07 6139507 6145709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1021 138 432 Calmodulin-binding Proteins AT2G36910 26.246 1.89e-14 75.9