Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1020 ATGAGTTTGATTGTGGGTTCTTGGCCATATCGTTTCTTTCTGTATTGGTTATGTAAATTTGTACAATATTCATATTGTATATGTTATAAAGTATCACTGCGCGCTGGCCTCGTTTGCTTGAAGTCAAGTATTGACAACGCGGGGATGTTGGAGAATTACAGGCTTGCTGGAGGCTGTGTTGTTATGTTTTGGGGACATCAAGGCAGCGAGCTGCATTTTCCAAAGAATTCACGATTTAACGTAATCTCCTGGACTTCCATGATCGCAGCTATTGTTGACATGTATGGGAAATGTGGGAATATCGAGAAAGCTATTCAAGTTTTTGAGCAACTCCCAGAAAGGGACACACTTTGTTGGACAGCTTTGATTGCTGGACTAGCCATGCAAGATTATGGGCAGAAAGCCCTTCAATATTTTTCTGAAATGGTGAAAGCAGGGTTTAATCCAAGAGATGAAGAAGAAAAGGAAGATGCACTTCACAGGCATAGTGAAAAATTGGCCATTGCATTTGGATTTCTGAAGACACAAGCTCGTATTCCAATTCGCATAGTGAAGAACTTACGAGTCTGTGAAGATTGCCACACGGCTACGAAGTTCATCTCAAAGAGCTTACCCGGAGAACGCGCTAAAGACATTATTTTGATGGGTAATAAACCAAGCGGGAATGGCTTCTTGGAGTCTGTTTCGGCCGCTGTTTTTCGAGACCGCCCTCGGGGCGGCAGGCTTCCTGCGCCGGACGCGTCCACCACCGATAAAACTCCGGTAAATGCTGGTTCTGATCATTCGGGCTCAGGTCAGAGTAGATCACCTGAAACGGTGAAGATTGACAATGTCGAATCGGAACCACGGGAGCCTGAAAATCCTTCCGCTGATGACGCGAAATCTGACAAATCCACTCACGTTAAAAGGGTGTCCAGTGTTGGACGTCAAATTGAATCGGTGCTGGGAAGAAAAACTCAAAACTTGAAGGATGTTTATAGTCTAGGGCGGAAGCTAGGACAAGGGCAATTTGGGACGACATTCTTTTGTTTAGAGAAGACAACCGGAAAAGAGTTCGCTTGTAAAACGATCGCCAAGAGAAAATTGACAACTATTGAGGACGTGGAAGATGTTAGAAGGGAGATTCAGATAATGCACCATTTGGCTGGTCACCCCAATGTGATACAAATATTTGGTGCTCATGAGGACGCCGTTGCTGTCAATCTTGTTATGGAATTTTGTTCTGGTGGGGAGCTTTTTGACAGGATCATACAGAGAGGACACTACACTGAGAGAAAAGCGGCTCAGCTCGCAAGGGTAATGGCCCATATTGTGGAGGCCTTCCATTCTTTGGGTGTCATGCATCGGGACTTGAAGCCGGAGAATTTTCTGTTCGCTAGCCAGGACGAAGATTCACTTCTCAAGACAATAGATTTTGGGCTTTCCGTGTTCTTCCAACCGGGTCAAACATTCACTGATGTAGTTGGCAGCCCGTATTATGTGGCCCCTGAAGTTCTGCTGAAGCACTATGGTCAAGAATGTGATGTTTGGAGTGTTGGGGTAATCATTTATATATTACTATGTGGAGTTCCGCCATTTTGGGATGAGACCGAGGAAGGAATTTTTGAGCAAGTTTTGAGAGGAGAACTTGACTTTATCTCTGAACCATGGCCTAGCATTTCTGAGAGTGCAAAGGATCTTGTCCGTAGAATGCTAATAAGAGACCCTAAAAAGAGGATGACAGCACATGAAGTTCTTTGCCACCCTTGGGTTCAGGTGGACGGTGTTGCTCCTGACAAGCCTCTTGATTCTGCTGTCTTGTCTCGTTTGGAGAAATTTTCTGCTTTGAACAAGCTTAAGAAGATGGCCATTAGAGTAATTGCTGAAAGTCTGTCTGAGGAGGAAATTGGAGGGCTGAAAGAAATGTTCAAGATGATAGACGCAGATAATAGTGGACACATTTCTCTAGAGGAACTGAAAAATGGATTGGAGAAAGCGGGTGCCAATCTCAAGGAACCTGAAATTGTTAGCTTAATGCAAGCGGCAGACATTGATAATAGTGGCACCATCGACTATGGTGAATTCATAGCAGCCATGCTTCATAAGAACAAGGTTCATAGGGAGGAGCATCTATTTGCAGCTTTCAACTACTTTGACAAAGATGGGAGTGGGTACATTACACGAGATGAACTTGAACATGCCTGCGAACAGTTTGGTCTGCAAGATGTTCAACTAGATGACATGATAAAAGAAATTGACCGGGATAATGATGGGCGAATTGATTACAGTGAGTTTGTTGCAATGATGGAAGACGCTGGTATTGGCAAAAAGGGACTAGAAAATACAATGAGCAAAATTGCGGGTGCTTTCAAGCCTCAGTGA 2361 0.4413 MSLIVGSWPYRFFLYWLCKFVQYSYCICYKVSLRAGLVCLKSSIDNAGMLENYRLAGGCVVMFWGHQGSELHFPKNSRFNVISWTSMIAAIVDMYGKCGNIEKAIQVFEQLPERDTLCWTALIAGLAMQDYGQKALQYFSEMVKAGFNPRDEEEKEDALHRHSEKLAIAFGFLKTQARIPIRIVKNLRVCEDCHTATKFISKSLPGERAKDIILMGNKPSGNGFLESVSAAVFRDRPRGGRLPAPDASTTDKTPVNAGSDHSGSGQSRSPETVKIDNVESEPREPENPSADDAKSDKSTHVKRVSSVGRQIESVLGRKTQNLKDVYSLGRKLGQGQFGTTFFCLEKTTGKEFACKTIAKRKLTTIEDVEDVRREIQIMHHLAGHPNVIQIFGAHEDAVAVNLVMEFCSGGELFDRIIQRGHYTERKAAQLARVMAHIVEAFHSLGVMHRDLKPENFLFASQDEDSLLKTIDFGLSVFFQPGQTFTDVVGSPYYVAPEVLLKHYGQECDVWSVGVIIYILLCGVPPFWDETEEGIFEQVLRGELDFISEPWPSISESAKDLVRRMLIRDPKKRMTAHEVLCHPWVQVDGVAPDKPLDSAVLSRLEKFSALNKLKKMAIRVIAESLSEEEIGGLKEMFKMIDADNSGHISLEELKNGLEKAGANLKEPEIVSLMQAADIDNSGTIDYGEFIAAMLHKNKVHREEHLFAAFNYFDKDGSGYITRDELEHACEQFGLQDVQLDDMIKEIDRDNDGRIDYSEFVAMMEDAGIGKKGLENTMSKIAGAFKPQ 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1020 786 CDD EFh 632 692 IPR002048 GO:0005509
Lele07g1020 786 ProSitePatterns EF-hand calcium-binding domain. 676 688 IPR018247 -
Lele07g1020 786 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 115 149 IPR002885 -
Lele07g1020 786 Pfam PPR repeat 118 147 IPR002885 -
Lele07g1020 786 Pfam PPR repeat 91 114 IPR002885 -
Lele07g1020 786 ProSiteProfiles EF-hand calcium-binding domain profile. 627 662 IPR002048 GO:0005509
Lele07g1020 786 FunFam Calcium-dependent protein kinase 1 328 411 - -
Lele07g1020 786 CDD EFh 703 762 IPR002048 GO:0005509
Lele07g1020 786 ProSiteProfiles EF-hand calcium-binding domain profile. 699 734 IPR002048 GO:0005509
Lele07g1020 786 Gene3D Transferase(Phosphotransferase) domain 1 412 591 - -
Lele07g1020 786 ProSiteProfiles EF-hand calcium-binding domain profile. 737 768 IPR002048 GO:0005509
Lele07g1020 786 MobiDBLite consensus disorder prediction 274 303 - -
Lele07g1020 786 Pfam Protein kinase domain 326 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1020 786 SUPERFAMILY EF-hand 624 762 IPR011992 -
Lele07g1020 786 SUPERFAMILY Protein kinase-like (PK-like) 326 585 IPR011009 -
Lele07g1020 786 Gene3D Tetratricopeptide repeat domain 72 160 IPR011990 GO:0005515
Lele07g1020 786 Gene3D Phosphorylase Kinase; domain 1 328 411 - -
Lele07g1020 786 ProSitePatterns EF-hand calcium-binding domain. 712 724 IPR018247 -
Lele07g1020 786 Pfam DYW family of nucleic acid deaminases 150 204 IPR032867 GO:0008270
Lele07g1020 786 SMART efh_1 737 765 IPR002048 GO:0005509
Lele07g1020 786 SMART efh_1 631 659 IPR002048 GO:0005509
Lele07g1020 786 SMART efh_1 703 731 IPR002048 GO:0005509
Lele07g1020 786 SMART efh_1 667 695 IPR002048 GO:0005509
Lele07g1020 786 ProSiteProfiles EF-hand calcium-binding domain profile. 663 698 IPR002048 GO:0005509
Lele07g1020 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Lele07g1020 786 Gene3D - 592 765 - -
Lele07g1020 786 ProSitePatterns EF-hand calcium-binding domain. 640 652 IPR018247 -
Lele07g1020 786 ProSitePatterns Protein kinases ATP-binding region signature. 332 359 IPR017441 GO:0005524
Lele07g1020 786 TIGRFAM PPR: pentatricopeptide repeat domain 89 114 IPR002885 -
Lele07g1020 786 TIGRFAM PPR: pentatricopeptide repeat domain 118 149 IPR002885 -
Lele07g1020 786 PANTHER SERINE/THREONINE-PROTEIN KINASE 318 758 - -
Lele07g1020 786 MobiDBLite consensus disorder prediction 249 273 - -
Lele07g1020 786 ProSiteProfiles Protein kinase domain profile. 326 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g1020 786 FunFam Calcium-dependent protein kinase SK5 412 596 - -
Lele07g1020 786 FunFam Calcium-dependent protein kinase 1 592 766 - -
Lele07g1020 786 ProSitePatterns EF-hand calcium-binding domain. 746 758 IPR018247 -
Lele07g1020 786 Pfam EF-hand domain pair 701 763 IPR002048 GO:0005509
Lele07g1020 786 Pfam EF-hand domain pair 632 692 IPR002048 GO:0005509
Lele07g1020 786 CDD STKc_CAMK 325 583 - -
Lele07g1020 786 MobiDBLite consensus disorder prediction 235 306 - -
Lele07g1020 786 SMART serkin_6 326 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1020 Lele-ChrLele07 6125830 6135675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1020 215 773 EF-hand Containing Proteins AT2G38910 70.840 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele07g1020 Pkinase 7.5e-72 CL0016