Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1019 ATGGATTCAGAAGCAGTTCCATCTTCCACGAATTCAGTAAAATGTTGCGACTGCGACTGTAGTTGCTCATTATCAGGTGATTCTTCAGCAACCTGGCTTCGTACTGTTAAACGGAAACTTGATGAGTTTGAACGGGATGACAAATTCTCTATACCTGAGTTGGATTACTCTTCAGTTGCACGGGTCCAAATCGAAAATGAATGTAAAGCGTTACGTGAGACAGTTACTAGGCAACAGCAAGCAATACAAGATCTGTGTGCTGAATTGGAGGAGGAGAGAAATGCTTCAACAACGGCAGCAAATGAGGCCATGTCTATGATATTGAGATTGCAGAGGGAGAAATCAGAGATTCAAATGGAAGCTCGGCAGTTCAAACGTTTTGTAGAGGAGAAGACGTCACATGACCAGGAGGAGCTTTTAGAATTGGAGGACTTGTTGTATAAGAGAGAGCAGACAATACAAGCGCTTACATGTGAAGTTCAGGCTTATAAGCACAGGATGATGAGTTATGGCCTCACGGAATCAGAGGCAGCAGGTGAAAGGAACCTGAGCTTGGGGGAATCAGGTGATCAATATGAACTCCCCACCTATGACTACCCTCCTTTAAAATGCATCGGACATGCTGCCATGGATGCCGAGAATGATGACACAGATATTGAGAAATATGCATTTGGTGAAACTCCTTCTGATCGATTGAGAAACCTGGAAAATAGAATGTCCCAAATGGAGAGAATTTCTATTCATAACCAAGTGGATGGGGATTATACGGGGAAAGCTATTCTGGAGAAGGAGGTAGTTGGACAATCTCCAAGGCGGACTAGACATTTGAGAAAGACATCCAATGAATCAAGTTCATTCATAGTGGGTTCTCCCAATAGCTCTAAGAAGATGGATTATGTCTCACAACCAGATGACCGTTCCAATTTGAGAAGGGTGGATTATGCACTAGAAGCTGGTGATGATATGGGTGATAGAGTTTATACGGTTGACTCTGTTCATACGGGGACGCCACACAAAGGTTTTTCAGAGTCTAAATATGGAGCTGTTCATGAAGATTATTCGACTGCTCCAATGGAGTCACTGAATCATGCTGTTTTTGAAGATTCCGACATAAAGAAGCTTTACATGAGACTTCAAGTTCTTGAGGCTGATAGGGAATCAATGAGGCAGGCGATCATTTCAATGCGCACCGATAAAGCACAGGTTTTGCTACTTAAGGAAATAGCTCAACATTTGTGCAAAGGGATGTCCCCGCAAAGAAGAATGACAGTGAGGAAGCCGATTGTTGTTCGTAGTTTTTCATTCTTGTCACTTTTTAAGTGGATGATATCGTTGGTTTTTTGGAGAAAGAAAGCTGGTCAAAGCAAGTATATGTTTGGGCTACCAGCCAATGGCGTGGGCTTACTAATGCTTCTGGACAAGAGGCCCCGTGGGAGGCCATGGAGATGCGTCTCAGTCACCCAGTTGGGAGATTAG 1476 0.435 MDSEAVPSSTNSVKCCDCDCSCSLSGDSSATWLRTVKRKLDEFERDDKFSIPELDYSSVARVQIENECKALRETVTRQQQAIQDLCAELEEERNASTTAANEAMSMILRLQREKSEIQMEARQFKRFVEEKTSHDQEELLELEDLLYKREQTIQALTCEVQAYKHRMMSYGLTESEAAGERNLSLGESGDQYELPTYDYPPLKCIGHAAMDAENDDTDIEKYAFGETPSDRLRNLENRMSQMERISIHNQVDGDYTGKAILEKEVVGQSPRRTRHLRKTSNESSSFIVGSPNSSKKMDYVSQPDDRSNLRRVDYALEAGDDMGDRVYTVDSVHTGTPHKGFSESKYGAVHEDYSTAPMESLNHAVFEDSDIKKLYMRLQVLEADRESMRQAIISMRTDKAQVLLLKEIAQHLCKGMSPQRRMTVRKPIVVRSFSFLSLFKWMISLVFWRKKAGQSKYMFGLPANGVGLLMLLDKRPRGRPWRCVSVTQLGD 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1019 491 Coils Coil 61 95 - -
Lele07g1019 491 MobiDBLite consensus disorder prediction 267 304 - -
Lele07g1019 491 ProSiteProfiles GTD-binding domain profile. 66 164 IPR007656 -
Lele07g1019 491 PANTHER BNAANNG28530D PROTEIN 63 427 - -
Lele07g1019 491 Pfam Zein-binding 70 160 IPR007656 -
Lele07g1019 491 Coils Coil 100 120 - -
Lele07g1019 491 Coils Coil 371 391 - -
Lele07g1019 491 MobiDBLite consensus disorder prediction 280 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1019 Lele-ChrLele07 6123276 6125530 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1019 07 6123276 6125530 Lele13g1584 13 24894332 24896222 CCT
Lele07g1019 07 6123276 6125530 Lele14g1515 14 23291836 23293885 CCT
Lele07g1019 07 6123276 6125530 Lele15g0834 15 4836672 4838551 CCT
Lele07g1019 07 6123276 6125530 Lele16g0852 16 4778886 4780883 CCT
Lele07g1019 07 6123276 6125530 Lele07g1019 07 6123276 6125530 ECH
Lele05g0980 05 6059887 6062170 Lele07g1019 07 6123276 6125530 hybridization
Lele06g0839 06 5207579 5210763 Lele07g1019 07 6123276 6125530 hybridization