Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0998 ATGCTGCATTTTTCCATTTCCGAGGACGCTGTTGATCCTGTTGCTAAAGCTGCTTGTTTTGCATTAAAACCTGTGAAAAGCCCTGTGACAATATGTGGCGATATTCACGGGCAGTTTCATGATCTTGCTGAACTATTTCGAATTGGAGGGAAGTGTCCAGATACTAACTACTTGTTTATGGGAGATTATGTGGACCGGGGTTATTATTCAGTTGAAACTGTAACACTCCTTGTGGCACTAAAAGTGCGGTATCCCCAGCGCATAACTATTCTTCGTGGGAACCATGAAAGTCGCCAGATCACTCAAGTATATGGATTTTATGATGAATGCCTAAGAAAGTATGGTAGTGCTAATGTTTGGAAGATCTTCACAGACCTTTTTGATTACTTTCCGTTGACTGCATTGGTTGAGTCAGAGATATTTTGTCTGCATGGTGGACTCTCTCCTTCCATTGAGACTCTAGATAGTGTGAGGAACTTTGATCGTGTTCAGGAGGTTCCTCATGAAGGGCCCATGTGTGATCTGTTATGGTCTGACCCAGATGACAGATGTGGTTGGGGAATTTCTCCTCGTGGTGCTGGATATACTTTTGGCCAGGATATATCTGAACAATTCAATCACACAAACGACCTTAAGTTGATCGCTAGAGCTCACCAGCTGGTTATGGATGGATTTAACTGGGCTCACGAACAAAAGGTGGTTACCATATTTAGCGCTCCTAATTACTGTTATCGGTGCGGGAACATGGCTTCCATATTGGAAGTTGATGATTGCAAGGACCACACTTTCATCCAGTTTGAACCTGCTCCTAGGAGGGGAGAACCAGATGTTACCCGTAGAACACCTGATTACTTCCTTTGA 861 0.4355 MLHFSISEDAVDPVAKAACFALKPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDSVRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNDLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCKDHTFIQFEPAPRRGEPDVTRRTPDYFL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0998 286 CDD MPP_PP2A_PP4_PP6 23 270 - -
Lele07g0998 286 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 22 286 - -
Lele07g0998 286 ProSitePatterns Serine/threonine specific protein phosphatases signature. 91 96 IPR006186 GO:0016787
Lele07g0998 286 FunFam Serine/threonine-protein phosphatase 5 286 - -
Lele07g0998 286 Gene3D - 8 286 IPR029052 -
Lele07g0998 286 Pfam Calcineurin-like phosphoesterase 28 219 IPR004843 GO:0016787
Lele07g0998 286 SMART pp2a_7 6 270 IPR006186 GO:0016787
Lele07g0998 286 PRINTS Serine/threonine phosphatase family signature 210 230 IPR006186 GO:0016787
Lele07g0998 286 PRINTS Serine/threonine phosphatase family signature 57 84 IPR006186 GO:0016787
Lele07g0998 286 PRINTS Serine/threonine phosphatase family signature 154 181 IPR006186 GO:0016787
Lele07g0998 286 PRINTS Serine/threonine phosphatase family signature 28 55 IPR006186 GO:0016787
Lele07g0998 286 PRINTS Serine/threonine phosphatase family signature 90 114 IPR006186 GO:0016787
Lele07g0998 286 PRINTS Serine/threonine phosphatase family signature 125 151 IPR006186 GO:0016787
Lele07g0998 286 PRINTS Serine/threonine phosphatase family signature 232 248 IPR006186 GO:0016787
Lele07g0998 286 SUPERFAMILY Metallo-dependent phosphatases 22 271 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0998 Lele-ChrLele07 6010588 6014559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0998 27 216 Calmodulin-binding Proteins AT5G63870 35.683 1.91e-32 119