Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0996 ATGTTCTGTTATTTGCGGAACACTGAGCTTGTGGATTTAGGGTTGTATATCGAGGATCTATCCAGATTACCAGTTTCTCGAAAATTTAGGGCCAGTGTTCTCTCAGCTTCGCGACTTCCGGAATTAGGCATTTCTGAGGATTTTTTTTTTGGTAATGTCCTTCCCGGTTCTGTAGAATGAGATATTTCTTTGCTAAAGTTGAAATATTGCTCTCTATACGAGACTCGCAAACTCTGTCAGTGTTATCAATACCTGCAATGCCGAGGCATAGTGAAGGTCCGGCTCAAATGGGTAAAAAACCGAAGTATTGATCACATAATTGACAAGGAAACGGATTTGAAGGCTGCTTGTCTACTCAAGGACGCGATTAAGCGATCGTCCACCGGTTTTCTCACAGCAAAATCTGTAGCTGACTGGCAAAAACTGCTTGGCCTCACAGTCCCGGTTCTCCGTTTCATGCGTAGGTACCCCACTCTCTTTGAAGAATTTCCACATCCTCGTTGGCCTAGTCTGCCTTGCTTCCGTTTGACAGATACTGCAGTATTGTTGGACTCGCAAGAACAAAGCATTTACGAGGCCCGCGAGAGTGATGTTGTCGAACGGCTTTGTAAGGTACTTATGATGATGAAAACTCGAACTGTGCCGCTACAATCCCTTCATCCTTTGAAATGGGATCTAGGTTTGCCGGATTGTTTTGAGAAGACACTTGTTCCAAAATACCCAGATAATTTTCGATTTGTCAAGGCCTCAAATGGTGTCACCTGCCTGCGACTAGCAAATTGGTGTGAGGAATTTGCAGTTTCGGCATTACAAAAGAGCAATGAAAGCAGGACATCTGGGGATGAGTACAGGCAATTCAAGAGAGGGCAAGCTTCTCTGGTTTTCCCCATGAATTTTCCAAGGGGTTATGGAGCACAGAAGAAAGTAAGGGCGTGGATGGAGGAATTTCAGAAGTTGCCTTACATTTGTCCTTACGAGGACTCTAGACAAATCGATCCAAATAGTGAATTAATGGAGAAGCGAGTTGTCGGAGTTCTGCATGAATTTCTAAGTTTAACCATGCACAAGAAAACAAAGAGGAACTACTTGAGAAGCTTGAGGGAGGAGTTGAATCTTCCCCATAAGTTTACCCGAATCTTCACAAGATATCCTGGCATATTTTACCTCTCACTGAAATGTAAAACAACGACTGTTACTCTTAGAGAAGGGTATCAACGTGGAAAACTAGTAGATCCACATCCTATTGCTCGTCTCAGAGAGAAGTTTTATCATGTAATGAGGACGGGGCTTCTTCATCGGGGAAAAGGCGCGAACTTTATAAATCAAGAAGACTTATTGCTAAACGGTGAAGTGGATGAAACAGGGCCGGGAGATTCTGAGGAGGAAGAGTCAGGAACAGGTGATGAATTCTATGAGGTTGAAGATTCAGACCTAGATGGAGCGTCTGATGGAGAGTAG 1458 0.4369 MFCYLRNTELVDLGLYIEDLSRLPVSRKFRASVLSASRLPELGISEDFFFGNVLPGSVEXDISLLKLKYCSLYETRKLCQCYQYLQCRGIVKVRLKWVKNRSIDHIIDKETDLKAACLLKDAIKRSSTGFLTAKSVADWQKLLGLTVPVLRFMRRYPTLFEEFPHPRWPSLPCFRLTDTAVLLDSQEQSIYEARESDVVERLCKVLMMMKTRTVPLQSLHPLKWDLGLPDCFEKTLVPKYPDNFRFVKASNGVTCLRLANWCEEFAVSALQKSNESRTSGDEYRQFKRGQASLVFPMNFPRGYGAQKKVRAWMEEFQKLPYICPYEDSRQIDPNSELMEKRVVGVLHEFLSLTMHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVTLREGYQRGKLVDPHPIARLREKFYHVMRTGLLHRGKGANFINQEDLLLNGEVDETGPGDSEEEESGTGDEFYEVEDSDLDGASDGE 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0996 485 MobiDBLite consensus disorder prediction 448 485 - -
Lele07g0996 485 MobiDBLite consensus disorder prediction 454 485 - -
Lele07g0996 485 Pfam Plant organelle RNA recognition domain 98 429 IPR021099 GO:0003723
Lele07g0996 485 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 84 458 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0996 Lele-ChrLele07 5998847 6000685 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0996 07 5998847 6000685 Lele13g1575 13 24806679 24819472 CCT
Lele07g0996 07 5998847 6000685 Lele14g1497 14 23176576 23182320 CCT
Lele07g0996 07 5998847 6000685 Lele15g0848 15 4925097 4930592 CCT
Lele07g0996 07 5998847 6000685 Lele16g0868 16 4892466 4897276 CCT
Lele07g0996 07 5998847 6000685 Lele07g0996 07 5998847 6000685 ECH
Lele05g0956 05 5919704 5921541 Lele07g0996 07 5998847 6000685 hybridization
Lele06g0822 06 5082805 5083793 Lele07g0996 07 5998847 6000685 hybridization