LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele07g0992	ATGCCGGCTGGACATGGTTTGAGATGTCGAACTAGAGACTCGTTCTCTAGGCCATTCAGGAAGAAGGGTACCATAGCACTGACAACCTACCTTAGAACTTACAAAATCGGTGACTATGTGGACATCAAAGTTAATGGTGCGGTCCACAAGGGCATGCCTCACAAGTTCTACCATGGACGCACCGGTCGTGTCTGGAACGTAACCAAGCGCGCAATTGGTGTCGAAGTGAACAAGCAGGTTGGGAACAGAATAATCAGAAAGAGAATTCATGTGCGTGTAGAGCATGTGATGCCCTCAAGGTGCACTGAGGAGTTTCGTCTGAGGAAAGTTCAGAACGATAAACTGAAGGCTGAAGCAAAGGCCAGGGGAGAAGTCATCAGCACCAAGAGGCAGCCCGTGGGACCTAAGCCTGGTTTCATGGTCGAAGGTGCTACATTGGAGACTGTAACCCCCATTCCATACGATGTCGTCAACGATCTCAAAGGCGGTTACTAG	495	0.497	MPAGHGLRCRTRDSFSRPFRKKGTIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKVQNDKLKAEAKARGEVISTKRQPVGPKPGFMVEGATLETVTPIPYDVVNDLKGGY	164

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele07g0992	164	FunFam	60S ribosomal protein L21	99	158	-	-
	Lele07g0992	164	Pfam	Ribosomal protein L21e	1	101	IPR001147	GO:0003735\|GO:0005840\|GO:0006412
	Lele07g0992	164	PANTHER	60S RIBOSOMAL PROTEIN L21	1	163	IPR001147	GO:0003735\|GO:0005840\|GO:0006412
	Lele07g0992	164	FunFam	60S ribosomal protein L21	1	98	-	-
	Lele07g0992	164	Gene3D	-	99	156	-	-
	Lele07g0992	164	SUPERFAMILY	Translation proteins SH3-like domain	3	99	IPR008991	-
	Lele07g0992	164	Gene3D	Ribosomal protein L21	1	97	IPR036948	GO:0003735\|GO:0005840\|GO:0006412
	Lele07g0992	164	ProSitePatterns	Ribosomal protein L21e signature.	37	62	IPR018259	GO:0003735\|GO:0005840\|GO:0006412

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele07g0992	Lele-ChrLele07	5978380	5979965	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele07g0992	1	164	Cytoplasmic Ribosomal Protein Gene Family	AT1G57860	85.366	8.37e-106	298

Showing 1 to 1 of 1 entries