Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0992 ATGCCGGCTGGACATGGTTTGAGATGTCGAACTAGAGACTCGTTCTCTAGGCCATTCAGGAAGAAGGGTACCATAGCACTGACAACCTACCTTAGAACTTACAAAATCGGTGACTATGTGGACATCAAAGTTAATGGTGCGGTCCACAAGGGCATGCCTCACAAGTTCTACCATGGACGCACCGGTCGTGTCTGGAACGTAACCAAGCGCGCAATTGGTGTCGAAGTGAACAAGCAGGTTGGGAACAGAATAATCAGAAAGAGAATTCATGTGCGTGTAGAGCATGTGATGCCCTCAAGGTGCACTGAGGAGTTTCGTCTGAGGAAAGTTCAGAACGATAAACTGAAGGCTGAAGCAAAGGCCAGGGGAGAAGTCATCAGCACCAAGAGGCAGCCCGTGGGACCTAAGCCTGGTTTCATGGTCGAAGGTGCTACATTGGAGACTGTAACCCCCATTCCATACGATGTCGTCAACGATCTCAAAGGCGGTTACTAG 495 0.497 MPAGHGLRCRTRDSFSRPFRKKGTIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKVQNDKLKAEAKARGEVISTKRQPVGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0992 164 FunFam 60S ribosomal protein L21 99 158 - -
Lele07g0992 164 Pfam Ribosomal protein L21e 1 101 IPR001147 GO:0003735|GO:0005840|GO:0006412
Lele07g0992 164 PANTHER 60S RIBOSOMAL PROTEIN L21 1 163 IPR001147 GO:0003735|GO:0005840|GO:0006412
Lele07g0992 164 FunFam 60S ribosomal protein L21 1 98 - -
Lele07g0992 164 Gene3D - 99 156 - -
Lele07g0992 164 SUPERFAMILY Translation proteins SH3-like domain 3 99 IPR008991 -
Lele07g0992 164 Gene3D Ribosomal protein L21 1 97 IPR036948 GO:0003735|GO:0005840|GO:0006412
Lele07g0992 164 ProSitePatterns Ribosomal protein L21e signature. 37 62 IPR018259 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0992 Lele-ChrLele07 5978380 5979965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0992 1 164 Cytoplasmic Ribosomal Protein Gene Family AT1G57860 85.366 8.37e-106 298