Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0990 ATGGACAAGTCCGAGAGAGAGACTCATAACTTCATGAACGTTCAGTCCTTCTCGCAGCTTCCATTTATCCGCCCTCCTCCTCTCAAAGAGAAGCCCGTTAAGCTCTTCGGCATTGAATTCCCCAACGCCGATTCTCCTAATTCTGCCCCTGATGATGCTCACTCCTCCGACGCTACCACCACCACCAACAACAATAATGCTTTTGACCTTGATTCCAAGGACTCCGCTGCCGCTACCTACAACAACTCCGAGACCAGCCGCAGGTTTGAATGCCATTACTGTTGTAGAAACTTTCCCACCTCTCAGGCCTTAGGTGGCCACCAAAACGCCCATAAACGAGAGCGTCAGCACGCCAAGCGAGCCCACCTTCAGTCCGCCATGGTGCACAATAGCCTCTCCGTCGACGCCGCCGCTCATGTCTATGGCCTCATGAACTACCGCCTCGGCTCCGCCCCATACCCCGCCTGGCATAATAGTAACTCTGCCGGTGGGAGGTTTTATGGATGCCATGGCGCGAGCTCATATCCTCATCTGAAACCCATCAGCGGTAGCCCCTTAACCTTTTGGCGGATCCCCTCCACCGTCCAAAATAACCCTACTGCTACGACTTTCAACCGTGACCGTTCGTTGCACTTACAGCATCCGTTGCCCTTGCTTGCCGGCGACGAAATTAACGTAGGGGCTTCTCATCATCAGGTCGGTTCCGCTTCGCAGAATAGCCTTGTTTATGACTCTAAACCCGGCGTTCACGACCATGTGAGTTTGGATCTTCACCTGTGA 780 0.5359 MDKSERETHNFMNVQSFSQLPFIRPPPLKEKPVKLFGIEFPNADSPNSAPDDAHSSDATTTTNNNNAFDLDSKDSAAATYNNSETSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHNSLSVDAAAHVYGLMNYRLGSAPYPAWHNSNSAGGRFYGCHGASSYPHLKPISGSPLTFWRIPSTVQNNPTATTFNRDRSLHLQHPLPLLAGDEINVGASHHQVGSASQNSLVYDSKPGVHDHVSLDLHL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0990 259 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
Lele07g0990 259 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
Lele07g0990 259 MobiDBLite consensus disorder prediction 39 70 - -
Lele07g0990 259 SUPERFAMILY beta-beta-alpha zinc fingers 86 117 IPR036236 -
Lele07g0990 259 Pfam C2H2-type zinc finger 88 113 - -
Lele07g0990 259 Gene3D Classic Zinc Finger 68 139 - -
Lele07g0990 259 MobiDBLite consensus disorder prediction 48 70 - -
Lele07g0990 259 PANTHER ZINC FINGER PROTEIN GIS 1 259 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0990 Lele-ChrLele07 5958430 5959209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0990 1 259 C2H2 Transcription Factor Family AT3G58070 40.590 2.80e-46 153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0990 07 5958430 5959209 Lele13g1573 13 24795692 24798895 CCT
Lele07g0990 07 5958430 5959209 Lele15g0851 15 4941621 4946028 CCT
Lele07g0990 07 5958430 5959209 Lele07g0990 07 5958430 5959209 ECH
Lele05g0951 05 5885509 5886288 Lele07g0990 07 5958430 5959209 hybridization
Lele06g0816 06 5026493 5027272 Lele07g0990 07 5958430 5959209 hybridization