Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0976 ATGGAGTTGGCCTTGAGTTTAGGGGACGCACCAAAACCCTTCTCTTTTCTTGACAAGCTCACCAACATGGTCCGCCAAGAACCTTCCTTTTGCATACCCCTCGCCGCTGCCACCAGATGGAATCATCACAGAGAAGGCGATGAAGATCATCGGACTTCATCAGCTCCTCCTGTTCAGCTCGATCTTCTTCCCTTCACCCCGCTTCCTCCAAACCCTCCTCTTCCTCCACCACCGCGCCTTTCAATTCCTTGGCTCTCCCGTCCATTGGGTGGCGAAGATATTTCATCAGATAGAGTGGTGACTGCGAGGGGTTTGGATGTGAACAGTGCGCCGGCGGACCTAGATGAGGCCGACGATGCTGCGGCAATCTCATCTCCCAACAGTGAGATCTCATCATTTCACATGGATTTCCTCGTCGGAAATAGTCATGGCACCGGCAGTTACAAGAGAGAGCACGAGGGCAACGCCGACAGACCCAGCGACGATGACGAAAACGGATCAACTCGCAAGAAACTCCGACTGTCTAAGGAACAGTCCGCTTTCCTGGAAGAGAGCTTCAAAGAACACACCACTCTCAACCCAAAGCAGAAACTTGCTCTGGCGAAGCAGTTGAACCTTCGTCCTCGTCAAGTGGAAGTTTGGTTCCAAAATAGACGTGCTAGGACGAAATTGAAGCAGACGGAAGTAGATTGTGAGTATTTGAAGAGATGCTGCGAGACGTTGACGGAGGAGAATAGGAGGCTACAGAAGGAGGTTCAAGAATTACGGGCTTTAAAGGCATCACAGCCGTATTACATGCAGCTTCCGGCCACCACTCTCACCATGTGTCCCTCCTGTGAGAGGGTCGTTACAAAATCTTCAATCGCCGGAGCCACATCCACCGCGACGGCGACCGCCACTTGCCCAAGCAGTGCGTCTGGAATCCCAGTAGCTCTGTCTCTCGGCAAGCCCGGAATGGTACCCTTCAGCAACGGTCAAGCCCAAGCTCACCAGGCCCAGGCTCATCAGACGGCTTCGTGA 1020 0.5324 MELALSLGDAPKPFSFLDKLTNMVRQEPSFCIPLAAATRWNHHREGDEDHRTSSAPPVQLDLLPFTPLPPNPPLPPPPRLSIPWLSRPLGGEDISSDRVVTARGLDVNSAPADLDEADDAAAISSPNSEISSFHMDFLVGNSHGTGSYKREHEGNADRPSDDDENGSTRKKLRLSKEQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKEVQELRALKASQPYYMQLPATTLTMCPSCERVVTKSSIAGATSTATATATCPSSASGIPVALSLGKPGMVPFSNGQAQAHQAQAHQTAS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0976 339 Coils Coil 231 261 - -
Lele07g0976 339 CDD homeodomain 169 226 IPR001356 GO:0003677
Lele07g0976 339 FunFam Homeobox-leucine zipper protein 18 155 230 - -
Lele07g0976 339 MobiDBLite consensus disorder prediction 146 171 - -
Lele07g0976 339 Gene3D - 173 223 - -
Lele07g0976 339 MobiDBLite consensus disorder prediction 144 171 - -
Lele07g0976 339 Pfam Homeodomain 169 223 IPR001356 GO:0003677
Lele07g0976 339 Pfam HD-ZIP protein N terminus 93 133 IPR006712 GO:0005634
Lele07g0976 339 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 52 300 - -
Lele07g0976 339 ProSiteProfiles 'Homeobox' domain profile. 165 225 IPR001356 GO:0003677
Lele07g0976 339 Pfam Homeobox associated leucine zipper 225 259 IPR003106 GO:0006355|GO:0043565
Lele07g0976 339 SUPERFAMILY Homeodomain-like 159 226 IPR009057 -
Lele07g0976 339 SMART halz 225 268 IPR003106 GO:0006355|GO:0043565
Lele07g0976 339 SMART HOX_1 167 229 IPR001356 GO:0003677
Lele07g0976 339 ProSitePatterns 'Homeobox' domain signature. 200 223 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0976 Lele-ChrLele07 5859929 5861287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0976 77 281 Homeobox Transcription Factor Family AT3G60390 56.250 1.67e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele07g0976 Homeodomain 2.7e-15 CL0123