Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele07g0955 | ATGGGGTCCACTCAGCTGAATTCGTTATGTTTTGGCGCGAAAATCGCTATTGGGGATTTAACGTATGTGTCTCTCCGGCTCACTGGGCCCTGGACGTTCGCTGCCGGAGACATGGGAGAAGGTGACGAGGAGAGCAGAAACGGAACTCCAGGGGAAGAACAAGATGAAGACTACATGGGGGATCTCTCTCAGTTTCTTCCTTCAGAAGCGTTTGGTCCTGTTGAATCTTCTTCCAGAAAGATCTCTAACAAGAAAACCGCAACGATAAACTCTTCCAAAAAGCAGTTGAAAAATCTCAGCTGGCAAGAACGAAGAAAACTTGAAAGACAAAAAAAGCAACAAGAAGAAGATGAGCAAACATTAGCAAAAGTGGAAGCTCCGATTCCACAATCAAACATTGGATTTAAGCTGCTCAAACAAATGGGTTATACGCCAGGCTCTGCCCTTGGAAAGGAGGGTTCAGGCAGGGCTGAACCTGTAGGAATTGATATTCGACGGTCACGAGCTGGCATAGGATTAGATGATCCCCACAAGGAGAAGAGGAAAAGGGAGGAGATGAATATGGAGGGGAAAAAGAGGAAAGAAGAGGCACTGATGGAAGACTTTGGGTTTAGGCAAAAGTCACAGTGGCAGAGTAGGAGAATTATAAGTAATTTCAAGAAGGCAAAGGCTGCTCTTGACCAGTTAGAGAACAGGGAAGTTGTACCACAGAATAATGATGAGGAGGAGGAGGGTGATGCTGATGAAGAGGATGAGGAAGAAATAACAGAAGAGGATTTACAGGATGTTCTGATGAAACTGAGGGATGAGCATTATTATTGCCTCTTTTGTGGGTGTAAGTATGAATCAGGGGATGCTCTTTTGGCTAACTGCCCTGGGACCAATGAAGATGACCACTAA | 900 | 0.4522 | MGSTQLNSLCFGAKIAIGDLTYVSLRLTGPWTFAAGDMGEGDEESRNGTPGEEQDEDYMGDLSQFLPSEAFGPVESSSRKISNKKTATINSSKKQLKNLSWQERRKLERQKKQQEEDEQTLAKVEAPIPQSNIGFKLLKQMGYTPGSALGKEGSGRAEPVGIDIRRSRAGIGLDDPHKEKRKREEMNMEGKKRKEEALMEDFGFRQKSQWQSRRIISNFKKAKAALDQLENREVVPQNNDEEEEGDADEEDEEEITEEDLQDVLMKLRDEHYYCLFCGCKYESGDALLANCPGTNEDDH | 299 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele07g0955 | 299 | SMART | DUF4187_2 | 242 | 299 | IPR025239 | - | |
| Lele07g0955 | 299 | PANTHER | UNCHARACTERIZED | 53 | 299 | IPR039249 | - | |
| Lele07g0955 | 299 | SMART | G-patch_5 | 128 | 174 | IPR000467 | GO:0003676 | |
| Lele07g0955 | 299 | MobiDBLite | consensus disorder prediction | 147 | 194 | - | - | |
| Lele07g0955 | 299 | MobiDBLite | consensus disorder prediction | 34 | 125 | - | - | |
| Lele07g0955 | 299 | MobiDBLite | consensus disorder prediction | 237 | 259 | - | - | |
| Lele07g0955 | 299 | Pfam | G-patch domain | 130 | 173 | IPR000467 | GO:0003676 | |
| Lele07g0955 | 299 | ProSiteProfiles | G-patch domain profile. | 130 | 176 | IPR000467 | GO:0003676 | |
| Lele07g0955 | 299 | Pfam | Domain of unknown function (DUF4187) | 248 | 299 | IPR025239 | - | |
| Lele07g0955 | 299 | Coils | Coil | 104 | 124 | - | - | |
| Lele07g0955 | 299 | MobiDBLite | consensus disorder prediction | 75 | 97 | - | - | |
| Lele07g0955 | 299 | MobiDBLite | consensus disorder prediction | 98 | 122 | - | - | |
| Lele07g0955 | 299 | MobiDBLite | consensus disorder prediction | 227 | 261 | - | - | |
| Lele07g0955 | 299 | Coils | Coil | 212 | 232 | - | - | |
| Lele07g0955 | 299 | MobiDBLite | consensus disorder prediction | 158 | 194 | - | - | |
| Lele07g0955 | 299 | MobiDBLite | consensus disorder prediction | 39 | 53 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele07g0955 | Lele-ChrLele07 | 5715947 | 5718641 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele07g0955 | 122 | 172 | C2H2 Transcription Factor Family | AT5G26610 | 43.137 | 4.01e-06 | 45.8 |