Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0954 ATGGTTTACAAGTGCCACTATATGCATCTCATTATCATTGCCTTCTCGGCAATTTTGAGTTCCCTGGGTTCCGCGTCAACTGATTCGGCTGACGTCACAGCTCTCCGAGATCTATACAAGACATTGAACCGGCCGCCGGTGTTGAAGAAATGGAATCTTGAAGATCCTTGTGAGGAATCTTGGACAGGAGTAGCATGTTCTGGGTCGTCAGTCATACACCTCAAAATTCAAGGATTGAATCTCACAGGACATCTTGGAAGTCAGCTCCATAATCTACATAATTTGAAGATGCTTGATGTCAGCTCCAATAACATAGCAGGGAAAATACCATTCAACTTACCCCCGAATGCCACACATATAAATATGGCTTGCAACTATTTGGATCAAAATATTCCTCACACATTACCTATGCTGAAAAGACTTCGACATTTGAATCTGAGCCACAATTTGTTATCTGGACCCATAGGCAACTTTTTTACAGGCCTAGATATTCTCAAAGAGATGGACCTTTCATATAACAATTTCACAGGAGATCTACCCAGTTCCTTTGGTTGCTTGAAAAACCTTACCGGATTGTTCTTGCAAAATAATAACTTCACTGGATCAGTCGCATATCTGGCTGACCTTCCACTTACAGATTTGAACATTCAAGGTAATCTATTTAGCGGCGTTATTCCGCAGCATTTTCAGTCCATACCAAATTTATGGATTGGAAGTAATAAATTCCATGCAGCAGCCAATTCTCCTCCCTGGGATTTTCCTTTGAGTAGAGCACCAGTTGTATACAACGTTAGTCGACCCCCCACGACTCAGGCAAATGCCATCGAGAACCATTCTTCTCGGAAAGTAAGTGAGCACAAGAAGAAACTTATGAGTGCTGGAGAAGTAGCTTTTATGGTTGGTGGGGGAACGCTAATAGTAACAGGTGTAGCGCTCTTCATTGCAATCCGTTTGAGTCGATTGAGCGAAAAGAGGCTCAAAATCTTAGAAAGCAGCCATATCTCATTGCAATCTCATCCAATCATTTCAACCATAGATAGCCCACCTACCGCACCAGAAGAAAGCCCACGAATCCCGCCATTTAATTCTGTATCTCTTTTGGGTCCAAGGCGATTGCCTCCCCTGCCCCATAACAGAACAGGGGAAACGTCAAGAAGAAGTTTTTCCAGAAGACGCAGATTCTCAGGAAGGACAAAAGTATACTCAGTGGGAGAGCTTCAGTTAGCTACAGACAGCTTCAGTGAAGACAATTTTCTGGGAGAGGGATCTTTGGGTCCTGTTTACAGAGCTGTGTTTCCAAATGGCCAAACTCTGGCTTTGAAGAATATCAACATGGCGGGCCTGTCTTTCCACGAAGAGGAAACGTTTTTGGATGTCGTTTCCACCGGTTCCCGTCTGAGGCACCCCAACATCGTTGCGCTTAATGGTTATTGTATGGAGCACGGGCAGCATCTTCTTGTTTACGATTATGTTAGAAACTTAACTCTGGAAGATGCTCTTCACAGTGACGCATACGAGCCTTTGTCTTGGGCCCTCCGCCTCCGCATTGCCCTTGGTGTTGCTCAGGCTCTGAACTATTTGCACTCGGCGTTCTCCCCTCCTGTAGCGCACGGCAACTTGAAGGCTGCCAATATCCTTGTCGACGAAAATCTGATGCCACGTGTCTGTGACTGTGGCCTTGCTGTTTTGAGACCGCTAGTGAGCAACAACGTCAGGGCTTATGAACTTGCAACTCAAGACGCAGGCTACATTGCACCAGACCATGGCGAACCAGAAATTAGCAAAACAAAGAGTGACGTCTATGCCTTTGGGGTGTTGCTTCTGGAATTATTAACGGCAAGGAAACCTTACGATGATTCGAGGCCAAGGGAGGAACAATACCTGGGACAATGGGCATCATCGAGGATACATGAGAATGAGAGTTTGGAGCAGATGATGGATCCAGGAATTCAAGGGACAGTTACAACCAAAGCTCTTTCTCGTTATGCCGATATCGTCTCCCTCTGCATACAGCCCGTGAAGGAATTCCGACCTCCAATGTCGGAGGTGGTTGACTCTCTTATAATCTGTTCAAAAAAGCAGAACATGGCCATATCCAAGAATGCAGATATTACTGACTTGGATTCACTTGACAAGTCTTTCCGTTCAACCAATACTCGCTTTCTGGGTTCCCCCGCTTATAGCTACGTTTCCGCCTGA 2199 0.4538 MVYKCHYMHLIIIAFSAILSSLGSASTDSADVTALRDLYKTLNRPPVLKKWNLEDPCEESWTGVACSGSSVIHLKIQGLNLTGHLGSQLHNLHNLKMLDVSSNNIAGKIPFNLPPNATHINMACNYLDQNIPHTLPMLKRLRHLNLSHNLLSGPIGNFFTGLDILKEMDLSYNNFTGDLPSSFGCLKNLTGLFLQNNNFTGSVAYLADLPLTDLNIQGNLFSGVIPQHFQSIPNLWIGSNKFHAAANSPPWDFPLSRAPVVYNVSRPPTTQANAIENHSSRKVSEHKKKLMSAGEVAFMVGGGTLIVTGVALFIAIRLSRLSEKRLKILESSHISLQSHPIISTIDSPPTAPEESPRIPPFNSVSLLGPRRLPPLPHNRTGETSRRSFSRRRRFSGRTKVYSVGELQLATDSFSEDNFLGEGSLGPVYRAVFPNGQTLALKNINMAGLSFHEEETFLDVVSTGSRLRHPNIVALNGYCMEHGQHLLVYDYVRNLTLEDALHSDAYEPLSWALRLRIALGVAQALNYLHSAFSPPVAHGNLKAANILVDENLMPRVCDCGLAVLRPLVSNNVRAYELATQDAGYIAPDHGEPEISKTKSDVYAFGVLLLELLTARKPYDDSRPREEQYLGQWASSRIHENESLEQMMDPGIQGTVTTKALSRYADIVSLCIQPVKEFRPPMSEVVDSLIICSKKQNMAISKNADITDLDSLDKSFRSTNTRFLGSPAYSYVSA 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0954 732 ProSiteProfiles Protein kinase domain profile. 413 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g0954 732 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 28 253 - -
Lele07g0954 732 Gene3D Transferase(Phosphotransferase) domain 1 492 715 - -
Lele07g0954 732 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 687 - -
Lele07g0954 732 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 378 490 - -
Lele07g0954 732 MobiDBLite consensus disorder prediction 369 389 - -
Lele07g0954 732 SUPERFAMILY Protein kinase-like (PK-like) 387 689 IPR011009 -
Lele07g0954 732 SUPERFAMILY L domain-like 31 236 - -
Lele07g0954 732 Gene3D Ribonuclease Inhibitor 28 257 IPR032675 -
Lele07g0954 732 Pfam Leucine rich repeat 158 199 IPR001611 GO:0005515
Lele07g0954 732 FunFam Leucine-rich repeat receptor-like protein kinase 491 698 - -
Lele07g0954 732 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Lele07g0954 732 Pfam Protein tyrosine and serine/threonine kinase 417 687 IPR001245 GO:0004672|GO:0006468
Lele07g0954 732 Gene3D Phosphorylase Kinase; domain 1 377 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0954 Lele-ChrLele07 5711390 5715552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0954 1 732 Strubbelig Receptor Gene Family AT5G06820 54.533 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele07g0954 PK_Tyr_Ser-Thr 2.7e-33 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0954 07 5711390 5715552 Lele13g1541 13 24590308 24593823 CCT
Lele07g0954 07 5711390 5715552 Lele14g1461 14 22974390 22981412 CCT
Lele07g0954 07 5711390 5715552 Lele15g0884 15 5133857 5136900 CCT
Lele05g0915 05 5637633 5641889 Lele07g0954 07 5711390 5715552 hybridization
Lele06g0778 06 4816584 4818040 Lele07g0954 07 5711390 5715552 hybridization