Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0940 ATGCTTCTTCCTCTCCACTTAGCTTCCATTCTCTTGTTTTTCTTAGCTTCTTTCGCCTCCTCATTGAACTCCGATGGTCTCTCTCTCCTCGCCATCAAAGCCGCCATCGAGTCCGACCCTTCCGGAGTTCTCAACTCGTGGTCCGATTCTGACTCCACCCCATGTCGCTGGGATGGGGTCGCCTGTGCCCATGACCGAGTCACCCAGCTCGTCCTGCCCAACAAAGGCCTCACTGGTTACATCCCATCTGAACTCGGTTTGCTCGACTCGCTCAGGCAACTCAGTCTTTCGCACAATAACTTCTCCAACGCCATTCCTTCCCGTCTGTTCAACGCGACCAGCCTCGTCGTTTTAGACCTCTCTCATAATCTCCTCTCTGGTCCCATTCCAACTGAGATCAGGTATCTCAAATCACTCGGGCATTTGGATTTATCCTCAAATACCCTTAATGGCTCTCTCCCTGAAGCTCTATCCGATTTCACTAATCTCGTTGGAACCTTGAATCTCTCTTACAATCACTTCTCGGGTGGAATCCCGGAGTCTTTGGGGCAACTCCCTGTGATAGTCAGTTTGGATCTCCAGAACAACAATCTGACAGGCAAAATCCCTCAAGTTGGTTCGTTGCTAAACCAGGGCCCTACAGCTTTCTCCGGTAACCCCGGGCTCTGTGGGTTCCCTTTGCAGAATGCATGCCCAGAAGCTCAGAATCCAGAGAATTACCCAAGCACCGACGACCCTGAAAACCCAAAAACCGTTAAACCTGGCTTTCCAGCGGGATTTCAAGAAGCGAAGGCGAAAGAGCGAGGTCTTTCCGTCATTGTCCCTATAATTTTCGGCGTCTTGTTGGTAGCAGGGGCCGTTTCGTTGTCAGTGTGGCTGCTGCGCAGACGATGGACGGTCGATTTGAACAAGTTAGGGAAGCAAAAACTAGACAATGAGCCCGACGGTGAAGGGCAAAAGGGTAAATTCGTGATAGTGGATGAAGGATTCAACCTGGAACTAGAGGATTTATTGAGGGCATCCGCATATGTGGTGGGGAAAAGTAAGAGTGGGATCGTATACAAGGTAGTGGCTGCTGGGAAAGGGTCGGGCCCGGCGGCGACTGTGGTGGCAGTCCGGCGGTTGGGTGAGGGTGATGCCACGTGGAAGCTCAAGGAATTCGAGGCTGAAGTGGAGACCATTGGGAGGGTCAACCACCCTAACATCGTCCGCTTAAGAGCATATTACTATGCAAGTGATGAAAAATTAATTATCTCTGATTTCATCCGCAATGGAAGCTTGCACACTGCGCTTCATGGTATCAAATTTCTCAGCCGTTGTTTTTGCTCAAAGTCCACAACAATGGCACCAAAGCGACAGAATTCAAAGCAGTCTATTGCAACCTCTGCAATGGCAGCTCCCCAAAACAACTACTTGGCACCAGAGGTGCGCATGAACGGAGGCAAATATACTCAGAAATGTGATGTGTATTCTTTTGGGATAGTGCTTTTAGAACTATTGACAGGACGGAGGCCAGAGAATGAGGGGGAAGTACTAGAGAGTTTCGTGAGGCAGGCATTCAGAGAAGAGAAGCCCTTGTGCGAGATTATAGACCCTGCACTTATGTCTGAGGTGCATGCTAAAAAACAAGTAGTTGCAGCATTTCATCTTGCACTCAACTGCACAGAACACGACGCAGAGTTGCGACCGAGAATGAGAACGGTATCGGAGAGCGTCGATCGCATCAAGGCACCGTGA 1737 0.5003 MLLPLHLASILLFFLASFASSLNSDGLSLLAIKAAIESDPSGVLNSWSDSDSTPCRWDGVACAHDRVTQLVLPNKGLTGYIPSELGLLDSLRQLSLSHNNFSNAIPSRLFNATSLVVLDLSHNLLSGPIPTEIRYLKSLGHLDLSSNTLNGSLPEALSDFTNLVGTLNLSYNHFSGGIPESLGQLPVIVSLDLQNNNLTGKIPQVGSLLNQGPTAFSGNPGLCGFPLQNACPEAQNPENYPSTDDPENPKTVKPGFPAGFQEAKAKERGLSVIVPIIFGVLLVAGAVSLSVWLLRRRWTVDLNKLGKQKLDNEPDGEGQKGKFVIVDEGFNLELEDLLRASAYVVGKSKSGIVYKVVAAGKGSGPAATVVAVRRLGEGDATWKLKEFEAEVETIGRVNHPNIVRLRAYYYASDEKLIISDFIRNGSLHTALHGIKFLSRCFCSKSTTMAPKRQNSKQSIATSAMAAPQNNYLAPEVRMNGGKYTQKCDVYSFGIVLLELLTGRRPENEGEVLESFVRQAFREEKPLCEIIDPALMSEVHAKKQVVAAFHLALNCTEHDAELRPRMRTVSESVDRIKAP 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0940 578 FunFam Leucine-rich repeat receptor-like protein kinase 138 233 - -
Lele07g0940 578 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Lele07g0940 578 SUPERFAMILY L domain-like 23 228 - -
Lele07g0940 578 SUPERFAMILY Protein kinase-like (PK-like) 344 570 IPR011009 -
Lele07g0940 578 Gene3D Transferase(Phosphotransferase) domain 1 436 578 - -
Lele07g0940 578 FunFam Leucine-rich repeat receptor-like kinase 27 137 - -
Lele07g0940 578 Gene3D Ribonuclease Inhibitor 165 233 IPR032675 -
Lele07g0940 578 Gene3D Ribonuclease Inhibitor 22 164 IPR032675 -
Lele07g0940 578 Gene3D Phosphorylase Kinase; domain 1 322 421 - -
Lele07g0940 578 Pfam Protein kinase domain 468 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g0940 578 ProSiteProfiles Protein kinase domain profile. 339 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g0940 578 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 459 576 - -
Lele07g0940 578 Pfam Protein tyrosine and serine/threonine kinase 345 432 IPR001245 GO:0004672|GO:0006468
Lele07g0940 578 Pfam Leucine rich repeat 90 149 IPR001611 GO:0005515
Lele07g0940 578 SMART LRR_typ_2 136 159 IPR003591 -
Lele07g0940 578 SMART LRR_typ_2 88 112 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0940 Lele-ChrLele07 5630685 5633626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0940 22 577 Receptor kinase-like Gene Family AT3G57830 51.638 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele07g0940 PK_Tyr_Ser-Thr 2.7e-08 CL0016