Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0937 ATGATAACAGGAGTAAAACGCGGGTTCGAAGTACTCCGAAAACTTCAGAGTACGTGGGAGTTTGCAGGTGCTTTCCAGAATGAAGTAGACGCAGCAAAAGCGCGCGACTTGTTTGCCATCAAATTATGGGGCGAGTCCGCTCGCACTAATTTTCCTCCGAGTACCTACGAGAAAGAGCTCTTAGAAATGAAGGATATGAGCAGAGAAGAGTGCCTTGCTGCTATCAGAAAGATGAGTAATGATGATAAGATGAAGAGGTTGCTTAGTAAAGGCCTCTCAGTTTATCGTGGAGTCTACAGGATCCCAGAGCAGAATAGATGGCAAGCCAGGGTGGGTAAAGGCAAAGACACCCGAAACCTTTATGTGGGCACATTTGAAACGGAGGAGGAGGAGGCGAGAGCGTATGATATAGCGACAATAAGATTGAAGGGCCCAACCGCCGCTGCAAATCTGAATTTCGACCGGCATTCTTATGATATCGAAAGCATTCTTAAAAGTACTAAGATTCCGATCGGAAAGGGTGCTTCTAAGATGATTAGGAAATACACAGCGGATGAGATTCTTTTTCGCATCACTAACAACAACAATCCAGACCCATCACCTTCGACTGCCTCCTCCGAACTACTGTATCATCGGAACCCTAATCTCGTGAACACCGATGAGTCAGTGAGTGAGGTTGGAGTTGCTATTGGTGGTCCACTATTCGGAGCAGAAAACCAGAGGGTGGCGAATAGCGAAGCGTTTGTTTATGCGGATGATAATGATGATCGCCTGAAATTCCCAGTAGATGGGTTTTCTGAGTTTGCAATAGAGGTAGAAGATAATAATACAGAATCTCTGTGGAATGAAGCTCATGGTGAATTTCTGATGGCCAATTTGGTGAGCGGAAATGAATCGTTGAATGATTTTGAGAAAGGTCTTGATTCTATTGGGGATATCGACTGGAGTTTCGCGGACGAGGAGCCTCAAGAACCTGCGGTTGCCTTCTTCAACCAGACTAATAAATAA 1008 0.4524 MITGVKRGFEVLRKLQSTWEFAGAFQNEVDAAKARDLFAIKLWGESARTNFPPSTYEKELLEMKDMSREECLAAIRKMSNDDKMKRLLSKGLSVYRGVYRIPEQNRWQARVGKGKDTRNLYVGTFETEEEEARAYDIATIRLKGPTAAANLNFDRHSYDIESILKSTKIPIGKGASKMIRKYTADEILFRITNNNNPDPSPSTASSELLYHRNPNLVNTDESVSEVGVAIGGPLFGAENQRVANSEAFVYADDNDDRLKFPVDGFSEFAIEVEDNNTESLWNEAHGEFLMANLVSGNESLNDFEKGLDSIGDIDWSFADEEPQEPAVAFFNQTNK 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0937 335 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13 181 - -
Lele07g0937 335 SUPERFAMILY DNA-binding domain 19 54 IPR016177 GO:0003677
Lele07g0937 335 Pfam AP2 domain 93 144 IPR001471 GO:0003700|GO:0006355
Lele07g0937 335 ProSiteProfiles AP2/ERF domain profile. 94 154 IPR001471 GO:0003700|GO:0006355
Lele07g0937 335 SMART rav1_2 13 58 IPR001471 GO:0003700|GO:0006355
Lele07g0937 335 SMART rav1_2 94 160 IPR001471 GO:0003700|GO:0006355
Lele07g0937 335 SUPERFAMILY DNA-binding domain 93 153 IPR016177 GO:0003677
Lele07g0937 335 Gene3D AP2/ERF domain 12 53 IPR036955 GO:0003700|GO:0006355
Lele07g0937 335 Gene3D AP2/ERF domain 94 155 IPR036955 GO:0003700|GO:0006355
Lele07g0937 335 CDD AP2 93 154 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0937 Lele-ChrLele07 5609621 5611561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0937 21 186 AP2-EREBP Transcription Factor Family AT1G51190 46.386 2.86e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele07g0937 AP2 4e-08 CL0081